Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2568 |
Symbol | |
ID | 3968677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3258658 |
End bp | 3260259 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637921666 |
Product | peptidase M24A |
Protein accession | YP_528040 |
Protein GI | 90022213 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGAAG AAAGTTCTAC TCCCCCAGTT AAAAAAGCGC CCGGTCTACT TAGGTCTACT GCGCTCGTTG GAATAATGAC AATGATGTCG CGTGTGCTTG GTTTGGCCCG CGATGTGCTC TTCGCCCGTT ATATTGGTGC TGGCCCCGAT GCCAGTGCTT TCTTCTTGGC TTTTAAAATC CCTAACTTTT TACGCAGGTT GTTCGCAGAA GGCGCTTTTG CGCAGGCGTT TGTGCCTGTG CTATCCGAAT ACCGTACGAG CGGCAGTGTA GATGCAGTGC GGGGCTTGAT AGATAGAATT GCTGGCTGTC TTGGGTTATC CCTTATTGCT ATTACGGTAG TTGCTGTTGT GGCGGCACCA GCATTTACAG CCGTTTGGGG TGTTGGCTTG CTGGTGAAAG GCGAAACGGC TATGTTTTGG CTTGCTAGCG ACCTGTTGCG TATTACCTTT CCCTATTTGT TGCTTATCTC GTTAACTGGG TTTGCTGGCG CAATTCTCAA TAGTTACGAT CGCTTTGCTA TTCCAGCCAT AACCCCAGTG TTCTTAAATG TGTGCCTAAT TGTGGCCGCG GTGTTCGTAT CGCCACTTAT GGATGAGCCT GTAGTGGGGT TGGCGTGGGG TGTATTGGCG GCAGGGGTGG TTCAATTTGT GTTTCAGTTG CCGTTTTTAG CGCATCTGGG CTTACTACCT AGGCCTAAAG TTGATTGGAA AGACCCGGCC GTTAAAAAAG TGCTCACTCT AATGGCGCCG GCTATGTTTG GGGTCTCGGT TAGCCAAATT AACCTTATGC TAGATACCAT GTTGGCCACT TTCCTGCAGT CGGAAAGTAT TGCGTGGTTA TATTATTCAG ACCGCTTAAC CGAGCTGCCT TTAGGAGTGT TTGGTATTGC TATTGCCACG GTTGTGCTGC CTACGCTATC GCGCCAGTTT AGTAAGAATA CTCATGAAGG CTATGGTACA ACGCTGGACT GGGCGTTGCG CATGGTTATG CTTATTGCTG TGCCTGCGGC CATAGCATTA ATTGTGTTGG CAAAGCCCGT GTTGTTCACC CTGTTTCAAT ACGGCAAAAC ATCGGTAAAC GATGTGAATA TGGCGGCTTT GAGTTTGTGC GCTTATTCGT TAGGGCTTAC CGCTTTTATG CTTATTAAAG TATTGGCTAG CGCTTATTTC TCCCGCCAAG ATACCCGTAC GCCGGTGCGG ATCGGCATCA TAGCTATGGG TGCAAATATG GTGCTAAACC TACTGTTTGT GGTGCCTCTG CACTTCATTT ATCAAATTGG CCACATGGGT TTGGCAATGG CGACGGCATG CTCAGCGTTT TTGAATGCCG GGTTGCTTTA CCGCGGTTTA CGCAGGGCGG GCGTGTATCA GCCTGGCAGC GGATGGCTGA GGTTTTTTGT GCAGCTGGTT GGTGGCTCAA TATGCATGTT CGCAGCCCTT ATGGCGGCGG CGTATTATGT GCCCAGCTTT GAATTTTTAG CATGGCTAGA TAGGTGCATT TACATGGCGT TGTATGTGGC AATTGGTCTA TTTGCCTATG TTCTTGGCTT GGCGATTACT GGCTTGCGGC CTGGGCACCT GCGTCATCAC AGTTCTGAGT AG
|
Protein sequence | MSEESSTPPV KKAPGLLRST ALVGIMTMMS RVLGLARDVL FARYIGAGPD ASAFFLAFKI PNFLRRLFAE GAFAQAFVPV LSEYRTSGSV DAVRGLIDRI AGCLGLSLIA ITVVAVVAAP AFTAVWGVGL LVKGETAMFW LASDLLRITF PYLLLISLTG FAGAILNSYD RFAIPAITPV FLNVCLIVAA VFVSPLMDEP VVGLAWGVLA AGVVQFVFQL PFLAHLGLLP RPKVDWKDPA VKKVLTLMAP AMFGVSVSQI NLMLDTMLAT FLQSESIAWL YYSDRLTELP LGVFGIAIAT VVLPTLSRQF SKNTHEGYGT TLDWALRMVM LIAVPAAIAL IVLAKPVLFT LFQYGKTSVN DVNMAALSLC AYSLGLTAFM LIKVLASAYF SRQDTRTPVR IGIIAMGANM VLNLLFVVPL HFIYQIGHMG LAMATACSAF LNAGLLYRGL RRAGVYQPGS GWLRFFVQLV GGSICMFAAL MAAAYYVPSF EFLAWLDRCI YMALYVAIGL FAYVLGLAIT GLRPGHLRHH SSE
|
| |