Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2503 |
Symbol | |
ID | 3968785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3170879 |
End bp | 3173290 |
Gene Length | 2412 bp |
Protein Length | 803 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637921594 |
Product | hypothetical protein |
Protein accession | YP_527975 |
Protein GI | 90022148 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.20212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATAAGC GTTGTGGAGT ACTAAAAACC GCTTTCACTT TTGCAGCTGC AGTGCTTACT GCCGTTGTAT GCGCTAGTAC TGTTGCGGCT AAAAGCTTGC CTATTTGGTT TGGTGCGCCT GCTTTAGATT GGGAAAGCGA AGGCCTACCA ATGGGCAATG GTGCAATGGG CATTGTTGTA ACGGGGGAGG TTGCGCGCGA AACATTGCAA TTAAACGAAA AAACCTTATG GACAGGTGGC CCAGGCGCGA AAGGTTACAA TTTTGGTTTG CCTACCGATT CTATAAAGCA AGATGTAGCG CATGTAAGGC AGCAAATTAC CTTGCATAAT GGAATAGACC CGCAAACCGC TGCGGATAAG CTAGGCCAAA ACATGCATGG CTATGGCCAC TACCAAAGTT TTGGTGAGCT AGATATTCAA TACAACGATC AAACTGGGGC GGTTTCTAAT TACGTACGCA GTTTAGATTT AACCCAAGGC GTCGCAACGG TTGCCTACAC ACGCAACAAT ACGCACTACA AGCGTGAATA TTTTGTTAGT TATCCTCAGC AAGCTGCAAT AGTAAAACTT TCTGCATCTA ATAAACAAAG TATTAGCTTT GACTTAGGAG TGCGCGTACA CCCAAATCGC ACAATAGAAA CTCAAGTTAA AAGGGGCGTG CTCACTTTTA GCGGCAAGCT ATTTGATAAC AACCTGCAAT ATATTGGCAA GGTGCAAATA GTTGTTGATG GTGGGGAGCT AACAGAAAAT GAAAAAACTG GCCGTATACA AGTAAGCCGC GCCAACAGTG CAGTTATTTC TATTGTGGCT GGCACTAATT ATGCCCAAGC CTACCCGCAT TATCGGGGGA GGCTTCCTGT AAAAACACTA GATAAAAACT TAGAAAAAAT TAAAGCGTCC GAGTACAGCG CCCTGTTGGC AGAGCATCTT ACTGATTACA CAGCGCTGTT TGGGCGTGTA GAGCTATCAT TAATTGAAAA CGCGGAATCC TATTTACTGG CAAAGCCCAC TCCCGAGTTA CTTAAGCAAT ATAAAGGTGA GGGCAGTGCG CCTGAACGCG CATTAGAGCA GTTGTACTTT CAATTTGGTC GCTATTTGCT AATTGCATCT TCACGTAATG GGTCTCTACC TGCAAATTTG CAGGGCGTAT GGAATAACTC CGCAACTCCT CCTTGGAATG CCGACTATCA CGTCAATATC AACTTACAAA TGAACTACTG GCCCGCGCAA GTAACCAACT TGGGCGAGAC AGCGCTGCCG TTTTTCGACT TTATAGATTC ACTCGTAGAG CCCGGCAAGC AAAGTGCGCA AAAAGTGTTT GGCGCACGCG GTTGGACGCT GTTCCTTAAT ACCAATATTT TTGGTTATAC CGGCTTAATC GAATGGCCCA CCGCATTTTG GCAACCCGAA GCGGCTGCAT GGTTGGCGCA ACACTATTTT GAGCATTACC AGTTTTACCA AGACAACACA TTTTTAAAAG AGCGCGCATA CCCAGTAATG AAAGAGGCAG CGTTGTTTTG GGTAGATGTA CTTGTGGCCG ACCCCAATAC AGGCTTGCTT GTGGTGTCGC CAAGCTTTAG CCCAGAGCAG GGGCCGTTTG TAAGTGGTGC GGCTATGTCG CAACAAATAG TGTTTGATTT GTTTACCAAT GTTGTCGAGG CGGCGAACCT TGTTGGCGAT GCGGAATTCA AAAAACTTAT ACAAGCAAAA CTAGCTAAAT TGGACCCAGG TACGCGCATT GGTTCGTGGG GGCAATTGCA GGAATGGCAG CAAGACATAG ACGATAAAAC CAATAAACAT CGTCATATAT CCCATCTTTT TGCACTGCAC CCTGGCGATC AAATTTCTGT GCAAGCTACC CCGGCTTTTG CTGAAGCCGC CAAAGTAAGT TTGAACGCCC GTGGCGATGA AGGTACGGGT TGGAGTCGAG CGTGGAAAGT GAATTTTTGG GCGCGCTTAC TTGATGGCGA CCGCGCACAT AAATTACTTG CCGGCCAGCT TATGGGCAGC ACCTTACCAA ATTTATGGGA CACCCATCCG CCGTTTCAAA TTGATGGCAA CTTCGGCGCT ACGGCCGGCA TGGCAGAAAT GTTAATTCAA TCCCACACCG GTCAAATAAC ACTTTTACCT GCTTTGCCAA AGCAATGGCA AACGGGTGCT GTTACCGGCC TGCGAGCGCG AGGCGATGTA CAGGTAAGTA TGCGCTGGGC CAATAGCAAA CTTATTGATG CCACTCTTGT AGCGGGTAAG TCACAGCCTA TAAATTTAGC TCTACCAAAT TCGTGCACTA GCCCGACAGT TAAGCCGCAA GGTAGCAATA AAAATAAAGT GACGGTGAGT ATAGCCAACA CAGCGGTGGT GTTTTCCGCA ACGCGTGGCC AGCTGTATCG CGTAACTTGC TCGAATAAAT AA
|
Protein sequence | MYKRCGVLKT AFTFAAAVLT AVVCASTVAA KSLPIWFGAP ALDWESEGLP MGNGAMGIVV TGEVARETLQ LNEKTLWTGG PGAKGYNFGL PTDSIKQDVA HVRQQITLHN GIDPQTAADK LGQNMHGYGH YQSFGELDIQ YNDQTGAVSN YVRSLDLTQG VATVAYTRNN THYKREYFVS YPQQAAIVKL SASNKQSISF DLGVRVHPNR TIETQVKRGV LTFSGKLFDN NLQYIGKVQI VVDGGELTEN EKTGRIQVSR ANSAVISIVA GTNYAQAYPH YRGRLPVKTL DKNLEKIKAS EYSALLAEHL TDYTALFGRV ELSLIENAES YLLAKPTPEL LKQYKGEGSA PERALEQLYF QFGRYLLIAS SRNGSLPANL QGVWNNSATP PWNADYHVNI NLQMNYWPAQ VTNLGETALP FFDFIDSLVE PGKQSAQKVF GARGWTLFLN TNIFGYTGLI EWPTAFWQPE AAAWLAQHYF EHYQFYQDNT FLKERAYPVM KEAALFWVDV LVADPNTGLL VVSPSFSPEQ GPFVSGAAMS QQIVFDLFTN VVEAANLVGD AEFKKLIQAK LAKLDPGTRI GSWGQLQEWQ QDIDDKTNKH RHISHLFALH PGDQISVQAT PAFAEAAKVS LNARGDEGTG WSRAWKVNFW ARLLDGDRAH KLLAGQLMGS TLPNLWDTHP PFQIDGNFGA TAGMAEMLIQ SHTGQITLLP ALPKQWQTGA VTGLRARGDV QVSMRWANSK LIDATLVAGK SQPINLALPN SCTSPTVKPQ GSNKNKVTVS IANTAVVFSA TRGQLYRVTC SNK
|
| |