Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2491 |
Symbol | |
ID | 3968568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3147486 |
End bp | 3148643 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637921582 |
Product | AraC family transcriptional regulator |
Protein accession | YP_527963 |
Protein GI | 90022136 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACCAAA TAGCTCACGA TACACTGCTG TTTAACCTGC ACGACCTTAT TTTACTGATG GCCGTAGGCC AATACGTATT ACTGGCCGTA CTGCTATTTT GCACGCGTAA ACAAACCGAA AAGAGCAGCT ATTTACTGTG TGCCTTTCTA CTATTAAACG CGGCACAATC GGTAGACACT CTGATAATTT GGAGCGATCA ACTAAGACTA TTAACGCTTA ACTGGCACCC GAACTTATTC TTTTGGGGGC ACATAGGCGT TTGGCTACAG GGGCCATTAC TGTATTTATA CGTAGCCAGC GTGCTTTATA AAGATTTTCG TTTTAAACCT ACAGATGCGT TGCACCTATT ACCTGCAATA ACGGTAACCG GCTTACTTGT AAATGCTTAC TACAGCCTGC CAAAAGCCGA ACAAATACAA GGTATGCAAA ACTTGCAATT TATGTGGACC CCTCTAATGG GTAACCTCAC CACACTGCGG TACCTAAGCG TGGTTGCGTA TGGCGCATGG TGTTTGTTTG CGCTTGCCCG TTACCGCAAA CAACTTAGGC ATCAATATGC CAATTTAGAA GTAAGCGAAC GCAGCTGGCT AACATGGGTG GTATTGGGGG TTGTGCTTAT AGCTAGCTGG GCACTTGTCG TACACCTCAT AGGCAATAAT ATTGAACATA CCCTGTCAAA CTTTATGGGT ATAGGCGGCA ATTATTTTTC TTTTATATTT GTTAACTCGT TGGTGTTTAC CAGTATTCGC TACACCCATT TATTTGATGG CTTAAGCAGT ACACAACCCG TTAGCGCAGA AGAACCAACC GCAGAGGAAA AAGGCTTTAA GGACGAGCAC ATACTGCGTA TTCAAAACTA TATGCAACAA CATAAACCCT ATTTAGATAA CAACATTAAC TTAGAGCATC TTGCACAGAA GGTTTCCTTA CCGGAACGCA CCCTATCGCG CATAGTGAAT CAGCACTTTA ATAAAAACTT CTTTGAATTT ATAAACACTT ACCGAATAGA CGAAGCTAAA AAACTGCTGA AACAAGATAA AACAAAAGCA ATAATTGATG TGCTCGCCGA GGCGGGTTTT AGCAGCAAAT CTACATTTAA CTCTATATTC AAACAGCAAG TAGGTATGAC CCCTTCGCAG TACCGCAAAC TAGAGTAA
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Protein sequence | MNQIAHDTLL FNLHDLILLM AVGQYVLLAV LLFCTRKQTE KSSYLLCAFL LLNAAQSVDT LIIWSDQLRL LTLNWHPNLF FWGHIGVWLQ GPLLYLYVAS VLYKDFRFKP TDALHLLPAI TVTGLLVNAY YSLPKAEQIQ GMQNLQFMWT PLMGNLTTLR YLSVVAYGAW CLFALARYRK QLRHQYANLE VSERSWLTWV VLGVVLIASW ALVVHLIGNN IEHTLSNFMG IGGNYFSFIF VNSLVFTSIR YTHLFDGLSS TQPVSAEEPT AEEKGFKDEH ILRIQNYMQQ HKPYLDNNIN LEHLAQKVSL PERTLSRIVN QHFNKNFFEF INTYRIDEAK KLLKQDKTKA IIDVLAEAGF SSKSTFNSIF KQQVGMTPSQ YRKLE
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