Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2490 |
Symbol | |
ID | 3968567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3145429 |
End bp | 3147129 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637921581 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_527962 |
Protein GI | 90022135 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2730] Endoglucanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCTTT TAGACTTTAC CCGCACTGCG TTTAGCTGTA CACGAAAGCT TACCTTTTTG AAATCCGCGC TACTTATAAG CTGCTTTGCC GGGCTTACTG CCTGTGGTGG CGGGAGTGAT GGCGGTGCTG CAAGTGGCTC ATCCTCTAGC TCGTCTAGCA GCAGTTCGTC TAGTAGCTCT TCGAGCAGTT CTTCAACTAG TTCCTCAAGC TCCTCTTCAA GCTCTAGTTC GTCCAGTTCC AGCTCTTCGT CTAATAGTTC CTCTAGCTCC TCTGGTGGCG ATGCTTTAGC GTGCCAGCAT GAAATGGCAC CAGCGCTATT ATCTGCAAGT GATACTACCA TGGTGCAAGC GGAGTATTAC GATACCTGTG CTTCTTCGGC ATTAGATAAC ACCACTGGTA ACAGTGGCGG TGAGTTGCGA ACTGACGATG TAGATATAGT GGCCATTGCG GACGGCTATG CTATTACGGA TATGCAGTCA GGCGAGTACG TAGAATATTC ACTAACAGTG CAAACTTCCG GTTTGTTTGA CATTAGTTTT GCGGTACAGC CGCACGCAGC TAATACTGCC GGTTTGGCGC TGAGTGTAGA TGGCGCAGTG TTAGGCACAG TTGATATTGC CGCTAATGAC AGCACCGCAT TTGGCGAATA TACGCTTAAC GGCGTGTACA TAAGCGATGG CGCGCAAGTA ATAAGGGTAA CCATGGCCGG CGAAGGCGCT GCTATTGGGT TAGATTCCAT TGCCTTTAAT TACACCGATA ATACCGTTTA CACCCCAGAA AACGCCGTGT TGGGTATGGG AATAGGTATT AACCTAGGCA ATACCTTAGA TGCCTTCCCC AACGAAGGTG ACTGGGCACC GGCTGCGCAG GAATACTATT TTAAAGCCTA CAAGGATGCA GGTTTCCGCC ATGTACGCAT CCCAGCAACT TGGGATGATC ACACGGCTGA TACAGCCCCC TACGCTGTAA ATGCAGCACG TATGGATCGC ACTGAGCAGA TTGTAGATTG GGCCTTGGCG CAGGGCTATT TCGTAATTCT TAATGCCCAC CACGAACACT GGCTAAAAGA AAACTACGGC AATCAAACAT ACCGCGATCG CTTTGATGCA ATTTGGCAGC AAATTGCCGA ACGCTTTAAG AATAAGTCGG CTCGCTTAAT GTTTGAGATA CTCAATGAGC CAAACGGCAT GACAGTGGCC GATGTGGATG ACCTCAACCC ACGTATTCTC GATATTATTC GCGAAACCAA TCCCACGCGA TTGGTAGTGT TCTCTGGTAA TGGGTATACC CCTGTGGATG CCTTACTTGC GGCTGCAATC CCTAATGATG ATTACCTTAT TGGTAACTTT CACTCCTACG ACCCTTGGCA GTTTGGCGGT CAGTGCGTAC GATCGTGGGG TACAGAGCAA GATTACACCG ACCTAGAGAA CATATATAAG CGCGCAAATA CTTGGTCTGA GCAGCACGAC ATACCCGTTA TGGTGAACGA ATTTGGCGCT GCCCATTACG ATTTTACTGC ACCGCAGAAT GTATGTAACC AGCAGGCTCG TTTGGCTTAT TTAGGTGCCC ATGCCACATT TGCTATTCAG TACGGCTTTG GCGCAAGTGT ATGGGACGAC GGTGGATCAT TTGAGGTGTA CAAGCGCGGT GAAAATAGCT GGCGCGAAGC TAAAGATGTA TTAGTGGCGC CAAACCCGTA G
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Protein sequence | MFLLDFTRTA FSCTRKLTFL KSALLISCFA GLTACGGGSD GGAASGSSSS SSSSSSSSSS SSSSSTSSSS SSSSSSSSSS SSSSNSSSSS SGGDALACQH EMAPALLSAS DTTMVQAEYY DTCASSALDN TTGNSGGELR TDDVDIVAIA DGYAITDMQS GEYVEYSLTV QTSGLFDISF AVQPHAANTA GLALSVDGAV LGTVDIAAND STAFGEYTLN GVYISDGAQV IRVTMAGEGA AIGLDSIAFN YTDNTVYTPE NAVLGMGIGI NLGNTLDAFP NEGDWAPAAQ EYYFKAYKDA GFRHVRIPAT WDDHTADTAP YAVNAARMDR TEQIVDWALA QGYFVILNAH HEHWLKENYG NQTYRDRFDA IWQQIAERFK NKSARLMFEI LNEPNGMTVA DVDDLNPRIL DIIRETNPTR LVVFSGNGYT PVDALLAAAI PNDDYLIGNF HSYDPWQFGG QCVRSWGTEQ DYTDLENIYK RANTWSEQHD IPVMVNEFGA AHYDFTAPQN VCNQQARLAY LGAHATFAIQ YGFGASVWDD GGSFEVYKRG ENSWREAKDV LVAPNP
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