Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2440 |
Symbol | |
ID | 3965387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3084937 |
End bp | 3086103 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637921531 |
Product | acetylornithine aminotransferase |
Protein accession | YP_527912 |
Protein GI | 90022085 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.493949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0446911 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGTGT CGGCGCTAAT GAATACATAC GGTGAAAGAA AAACCACGTT AACCAAGGGT GATGGACCTT ATCTTTGGGA TAGCGAAGGC CGCCGTTATT TAGACGCTTT ATCTGGCATC GCTGTATGCG GGCTTGGCTA CAACTACCCA AGCGTAACCC AAGCTATTAG CGAGCAAGCC AAAACGCTTA TTCATTGCTC CAACTTATTT CTGATAGAGC CGCAGCAGGA ACTTGGCAAA CTATTGGTGC AAGCTTCCGG TATGGATAAA GTATTTTTTA GCAACTCTGG CGCAGAAGCT AACGAGGCAG CTATTAAACT TGCGCGAAAG TACGCACAAG ATAAAGGCAT TACTGCACCT CACATTATCA CCTGCGACAA AAGCTTTCAT GGTCGTACTA TGGCCACCCT ATCTGCTACG GGCAACCCCA AAGTTAAAGC GGGCTTTTTC CCAATGGTCG AAGGGTTTAG CCATGTACCT TACAACGATA TCGAAGCAAT CAAACAAGCG GCCACCGAAA ATACCATCGC CATAATGGTA GAACCTATTC AAGGTGAAGG CGGTGTTAAC GTGCCGGCCG ACGATTATTT AACGAACTTA CGCGCCTTGT GTGATGAAAA CGGCTGGCTT TTAATACTCG ATGAAATTCA AACGGGTAAC GGCCGCACCG GCGCTTACTT CGCTTACCAG CACACAAATA TCCACCCGGA TGTAGTTACC ACGGCCAAAG GCTTGGGTAA CGGTGTACCT ATTGGCGCTT GTTTGGCCAA AGGCAAAGCA GCAGAGGTGT TTCAACCAGG TAACCACGGG TCTACCTTTG GCGGTAATCC ACTAGCCTGC AGCGCTGCTG TTGCTACATT TAAAGCCTTA GTGAATGACG GCATTATGAA AAGCGGTGCC GCTACGGGCA ACAGCATGAT CGCCAAGTTT AAAGAACGCT TTGCCAATAA CCCTAAAGTG GTAGAGGTAA AAGGCCAAGG CATGATGATG GGTATACAAC TTAGTCAAGA CTGCCCTACT TTAGTTGAAC GCGCGAAAGA GAAAAACCTG CTGTTAAACG TAACAGCCGG CAATACTATT CGCCTGCTAC CGCCATTAAT TTTGACTGAA GAGCAAGCCC AAACGGTGGT GGATACTGTA GTACAACTTG TAGAAGAAAT TGAGTAA
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Protein sequence | MSVSALMNTY GERKTTLTKG DGPYLWDSEG RRYLDALSGI AVCGLGYNYP SVTQAISEQA KTLIHCSNLF LIEPQQELGK LLVQASGMDK VFFSNSGAEA NEAAIKLARK YAQDKGITAP HIITCDKSFH GRTMATLSAT GNPKVKAGFF PMVEGFSHVP YNDIEAIKQA ATENTIAIMV EPIQGEGGVN VPADDYLTNL RALCDENGWL LILDEIQTGN GRTGAYFAYQ HTNIHPDVVT TAKGLGNGVP IGACLAKGKA AEVFQPGNHG STFGGNPLAC SAAVATFKAL VNDGIMKSGA ATGNSMIAKF KERFANNPKV VEVKGQGMMM GIQLSQDCPT LVERAKEKNL LLNVTAGNTI RLLPPLILTE EQAQTVVDTV VQLVEEIE
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