Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2416 |
Symbol | |
ID | 3966073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3058186 |
End bp | 3060570 |
Gene Length | 2385 bp |
Protein Length | 794 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637921507 |
Product | cation transport ATPase |
Protein accession | YP_527888 |
Protein GI | 90022061 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCATA GCTGCTTTCA CTGTGGGTTG CCTGCGCACG AACAATACAG CGCAACGGTA GATGGCGAAC TCCGCAACTT TTGTTGTGTG GGCTGTCAAG CTGTTGCTAT GGCAATTGTA GAAGGCGGCC TAGGAGATTT TTATCAGTAC AGAGAAAGCA CTAACCCAAA AGTAAAAGAA GTGAGCCAGG CATACTTGGA GTTTGACCTA CATGAAGTTC AAGCCGATAT TATCTCCCGC GTGTCCCAAT CTACTTTTCG AGTTAGGTTT TATCTCGAAA GCATTTCCTG TGCTGCATGC GCATGGCTAA TTGAAAATTA TTTGGGCCAA ACAGAGGCAA TAAGTCGTGT GAGCGTGAAT GCAACCACGC AAATTTGCAC TATCGAGTGG GATAAATCCA AGTTGCCGCT TAGCAGCCTA ATGCATAAAT TGGAGTTAAT TGGTTACAGC CCGCGCCCAG CATCTAGCCA AGCCGCTGCC GAAAGCGCGC GCAATATACA GCGTAGCCAC TTAATGCGTT TAGGTGTTGC GGGCATAGGG ATGATGCAAG TGGGTATGGT CGCGGTGGCA TTGTATGCCG GCGGTATTCA AGGCATAGAA AGTGGCTGGC AAGGTTTTTT GCGCTGGGTA AGTTTTGTAT TTGCCACACC GGTTATGCTT TATAGCGCGC AGCCTTTTTT TTACAGTGCT TGGCGCGCAC TTAAGTTAAA AAGTTTGAAC ATGGATGTGC CTGTATGCAT AGCTTTAGTG CTTGCTTACG GCGCCAGTAT TTACGCAACG CTAACCAATA CTGGCGAAGT GTATTTTGAC TCGGTATCTA TGTTTACCTT TTTCTTATTG TTGGGGCGCT ATTTGGAAAT GCGCGCGCGC CATAGCAATC AAAATAAAAG CCAGCATAAC CTAAATTTAT TGCCTCTTAC CGCGCAAAAA GTACAAGACT CACAATATAT AACGGTACCG CTAAAAAGCG TAAAAGTTGG CGATACGCTG CATATTGAAG CTGGGGCTGT TTTTCCTGCC GATGGTACGG TTATAGCTGG TTCCACTACT GCAGATGAAT CTCTTTTAAC TGGCGAATCC ACTCCTGTTA ATAAAACAAA GGGCTGCAGT GTTATTGCAG GCTCTGTGAA CGGCGATACG GCCGTTACTA TCTGCGTAAC TGCAGTGGGC GACAACACCG CACTCTCGGT GATTGAAAAC CTAGTTGATG AAGCGCAGCA GCAAAAACCT GCACAGGTAG CTTTTGCCGA TAAAATAGCG GGCAAATTTG TGGCTGCGGT GTTGGTAGTT TCTTGCGTGG TGGGAGGGTA TTGGCTGTGG CAAGATTCCT CGCGCGCGCT GTGGGTGGTG CTCTCGGTTT TGGTTATTAC ATGCCCCTGT GCGCTTTCCC TTGCAACACC GGCAGCGCTT ACCGCTGGTA CAACTAAGTT GCGCGAGCAG GGCTTTTTGG TGCGCAGTAA GCATGTTTTA GAAACGCTCG CAAAAATTAA TCACGTGGTA TTTGATAAAA CAGGCACGCT TACCGCGGGG CAGTTCTCCA TCGAGCAAGT AGTTTGCGTG CGTGAATCAT TTGACGAAGG CAGCGTACTT ACCCTCGTGG CGGCGCTCGA GGCGCACAGC CGCCATCCCA TTGCTTCTGC ATTTAAACAC ATTCCTTTTA TCGAGCCCGC TTCGCAGGTA TCTGTTATTC CAGGCCTAGG TATAGAGGGC GATTGGATGG GCGCGCGCTA CAAGTTTGGC AAAAAAGAGT TGGCAGCCGA GCATGTAGAT TTCCCGCCTG CAATTTCTAG CAACAGCACA GGGCTGTGGC AATGCTTAGC GGATAGCAAC GGCGTGGTTG CGTGGCTGTG CCTTAGCGAT ACAGTGCGGC CAGAAACAGC AGAAGTGTTG AATGGGTTGC AGGCGCAAGG GTTGCGCACA TCGCTACTTA GCGGTGATAG GCAGGCCAAT GTGGATAAAT TTGCGTTAAA CCTTGCGCTT GCTCACCAAG CAGGTGACAT ATTGCCGCAG GGCAAGCTCG CTTACGTAAA CGAACATCAG CAAGCCGGCG ATACCATAAT GATGGTAGGC GATGGTATTA ATGATGCGCC AGTGCTATCG GGGGCAGACG TTTCTGTTGC CATGCCTAAG GCGACGGAGC TGGCGCAGAT AAAATCGGAT GCGGTATTGC TACACGACAA TTTACACACG CTATTGCAGG CGCTTGCCAC CGCAAAGACT GTACAGGCGG TTATTCGACA AAACCTTGCT TGGGCCTTGT TATACAATGT GCTGGCACTT CCTGCGGCGG CTATGGGTTT AATTCCACCG TACCTTGCGG CGGCGGGTAT GAGTTTAAGT AGCCTTGTCG TTGTAGTTAA CTCATTGCGC GTGGCACGCA CTTAA
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Protein sequence | MAHSCFHCGL PAHEQYSATV DGELRNFCCV GCQAVAMAIV EGGLGDFYQY RESTNPKVKE VSQAYLEFDL HEVQADIISR VSQSTFRVRF YLESISCAAC AWLIENYLGQ TEAISRVSVN ATTQICTIEW DKSKLPLSSL MHKLELIGYS PRPASSQAAA ESARNIQRSH LMRLGVAGIG MMQVGMVAVA LYAGGIQGIE SGWQGFLRWV SFVFATPVML YSAQPFFYSA WRALKLKSLN MDVPVCIALV LAYGASIYAT LTNTGEVYFD SVSMFTFFLL LGRYLEMRAR HSNQNKSQHN LNLLPLTAQK VQDSQYITVP LKSVKVGDTL HIEAGAVFPA DGTVIAGSTT ADESLLTGES TPVNKTKGCS VIAGSVNGDT AVTICVTAVG DNTALSVIEN LVDEAQQQKP AQVAFADKIA GKFVAAVLVV SCVVGGYWLW QDSSRALWVV LSVLVITCPC ALSLATPAAL TAGTTKLREQ GFLVRSKHVL ETLAKINHVV FDKTGTLTAG QFSIEQVVCV RESFDEGSVL TLVAALEAHS RHPIASAFKH IPFIEPASQV SVIPGLGIEG DWMGARYKFG KKELAAEHVD FPPAISSNST GLWQCLADSN GVVAWLCLSD TVRPETAEVL NGLQAQGLRT SLLSGDRQAN VDKFALNLAL AHQAGDILPQ GKLAYVNEHQ QAGDTIMMVG DGINDAPVLS GADVSVAMPK ATELAQIKSD AVLLHDNLHT LLQALATAKT VQAVIRQNLA WALLYNVLAL PAAAMGLIPP YLAAAGMSLS SLVVVVNSLR VART
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