Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2372 |
Symbol | |
ID | 3967366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3003134 |
End bp | 3004273 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637921463 |
Product | L-threonine O-3-phosphate decarboxylase |
Protein accession | YP_527844 |
Protein GI | 90022017 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.885121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.167538 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGCAG AAACTGAAGA AAAATCGTTT GATATAAAAC TATTTGAAAA AACCACCCAT AACCCGTCGT TTGCCAGTTT GACTAATCAT TTTCGCACTA CCAATGGCCT AAAAGATTAC TGTATTCCGG TAAATTCGTA TTTTCCGCCT GCACATATTA TGGATGAGCT ATTTAGGCGC TTACCATATG CATTGAAATA CTACCCAAGT TCTAATGAAT CTATCGCCGA TAATATCGCG CTTTTTTCTG GGGTAACTAA CCCAAATTGG ATAGTGGCGG GTAATGGCTC TACCGAAATT ATATCTTGGC TGAACTCGAT TTTTATAAAA GAGAGTATTT TTGTGCCTGT GCCTTCATTT GGGCGCTGGG TAGAAGAGCC CATGGGGCTA GGTGTGGACG TTAAAACCAT GCCGCATAGC GACGACATGC TGCAAAAAAT CACCGCGGAA TCTTACGTGG CAGAAGTGCT GGCCAGTAAG GCTAGAAATG CAGTTATTTG TAACCCCAAC AATCCAACGG GCACCTTGTT TTCTCGCGAA GAAATACTGT GGATACTCGA GCGACTTACA CACTTAGATA ACATCATTAT TGATGAGTCG TTTATTGATT TTTCTGCGGA GAACCCGCCA TCGGTAAAAA ACGACGTGGC CAACTTTAAT AACGTGTGGG TGTTAAAAAG CTTGGGCAAA AACCTAGGCT TGCACGGTGT GCGCATGGGG TATGCAATTA GTTGTGAGGC AAATATTCAA CGCATGAAAA AGCATTTGCC GTACTGGAAT GTAAATGGCA TAACAGAAAT GCTGCTATCG TTAATTAAAA CCGAGCAAAA AGCCTACGAC GAAAGTAGGC TAAAGAATAT TAACGATGCT ATTTACCTTT CTGAATGCGT AGAGCAAATT CGTGAGTTTA CAGTATTTCC AACGCATTCT AACTTTATTT TCGTAAAGTT AAGCGATGAG TTTGATGGTG AAGAACTGCG CAATAGAATG CTACAAGACC ATGCTTGTTT AATTCGTAAC TGCGGTAACA AGTTGGGGGC GTCAAAACAA TACTTTCGTA TAGCGGCAAG GCCAGTAGAA GATATTCACT ATTTAGTGGC TGCGTTAAAA GACGTTTTGG CCGGTATGAA AGTTGAATAA
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Protein sequence | MFAETEEKSF DIKLFEKTTH NPSFASLTNH FRTTNGLKDY CIPVNSYFPP AHIMDELFRR LPYALKYYPS SNESIADNIA LFSGVTNPNW IVAGNGSTEI ISWLNSIFIK ESIFVPVPSF GRWVEEPMGL GVDVKTMPHS DDMLQKITAE SYVAEVLASK ARNAVICNPN NPTGTLFSRE EILWILERLT HLDNIIIDES FIDFSAENPP SVKNDVANFN NVWVLKSLGK NLGLHGVRMG YAISCEANIQ RMKKHLPYWN VNGITEMLLS LIKTEQKAYD ESRLKNINDA IYLSECVEQI REFTVFPTHS NFIFVKLSDE FDGEELRNRM LQDHACLIRN CGNKLGASKQ YFRIAARPVE DIHYLVAALK DVLAGMKVE
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