| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2295 |
|---|
| Symbol | |
|---|
| ID | 3967348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 2919867 |
|---|
| End bp | 2920568 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637921386 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_527767 |
|---|
| Protein GI | 90021940 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000122918 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTTC GCCAGCTTTT TGACAAAGAA TCGTCCACTT ACACCTATTT AATAGCCGAC
TCAAAAACAG GCGAAGCGGC TATTATCGAC CCAGTACTTG AAAACACCGA TGCCTACCTA
CAACTTATAA ACGAGCTTGG GCTTACGCTT AAATTAGCAC TGGATACCCA TACCCACGCA
GACCACATAA CTGCACTAGG TAAATTGCGA GAGCAAACCC AATGCCACAC GATGCTTGGC
GAACAATCTC ACTCAGAATG CGCATCAAGC CGTTTTAGCG ATAAACAAAT TTTACGCGTA
GGCGAAATAG CAATAGAAGC GCTCTACACA CCAGGCCACA CAGATGACTC CTACAGTTTT
TTGGTAGATC ACGACGGCCA TAAAATGCTA TTTACAGGCG ACACACTATT GATTCGCGGC
ACAGGCAGAA CAGATTTTCA GAACGGCAAT GCCAAAGAGC AATTTAATAG CTTGAATAGA
CTGCTAGCAT TGGGCGACAA CACTTACGTT TACCCCGGGC ACGATTACAA AGGCTGGACA
ATTTCTACCA TAAACGAAGA GAAATTATTT AACCCACGCT TAAAACCCCA AACAGCCGAA
GCCTACGCAG AACTTATGGC AAAACTTAAT TTGCCCGATC CAAAACTTAT GGATATAGCC
GTACCGGCTA ACCAAGCCTG CGGCAATATT GCCACTAAAT AG
|
|---|
| Protein sequence | MIFRQLFDKE SSTYTYLIAD SKTGEAAIID PVLENTDAYL QLINELGLTL KLALDTHTHA
DHITALGKLR EQTQCHTMLG EQSHSECASS RFSDKQILRV GEIAIEALYT PGHTDDSYSF
LVDHDGHKML FTGDTLLIRG TGRTDFQNGN AKEQFNSLNR LLALGDNTYV YPGHDYKGWT
ISTINEEKLF NPRLKPQTAE AYAELMAKLN LPDPKLMDIA VPANQACGNI ATK
|
|---|
| |