| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2282 |
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| Symbol | |
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| ID | 3967958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2902450 |
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| End bp | 2903706 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921373 |
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| Product | ABC transporter, permease protein, putative |
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| Protein accession | YP_527754 |
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| Protein GI | 90021927 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0229478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAAT TATTTGATAC CGACGTTTGG CAAGAAATTT TCGACGTACT CAAACGCCAT
AAACTGCGCA CCGCCCTCAC CGCTTTTGGT GTGTTTTGGG GTATTTTTAT GCTGGTGGTT
TTAATGGGCG CAGGCAATGG TTTACAAAAC GGAGCAGAAA GTAATTTTAC TGGCGCTAAA
AACTCTGTGT TTATCTGGTC TGGCCGCCCC ACTAGCATTC CTTACAAAGG CTTATCGCGC
GGACGCTATA TTCGCCTTAA CGATACCGAC ATGGAAGCGC TGTACAGCCG CATTCCAGAA
ATACAACATA TAGCGCCCAG CAACGGCATG GGCGACAGGC CCGTAAATCA TGCAGACAAA
ACCGAAACCT ACAGCTTATC GGGTATTCAG CCCATCGAAA TTACTGCGCA AGGTTATCGC
TTAGAGCAAG GGCGATTTTT AAACGAGCTA GATATAGAGC AAAAAAGAAA AGTGGTGGTG
ATTGGCACCC ACGTACGCGA CGTTTTATTT AACGGTGAAA ATCCTGTTGG CAAAACCATA
AAAACACTGG GCGTACGTTT TCTAGTTGTA GGGGTTATTG CACCTGCTTC TCTCGCCGAC
TGGGCACAAC GCGACACACG CCGCGTTTAT TTCCCCAACA CCACATTGCG CAGCACGTTT
AACCAGCGCG ATGTCATTCA CCGTATGCTT ATTGCACCCA AAGACGGTGT AGATGCAGCC
TGGCTGGAGC AGCAAGTACA AACCGTACTC AAAGAGCGCC ACAAAATACA CCCCGATGAC
CACGGCGTAA TAGGTAGCTA TAACGCCCAA AAAGATTACA CTCGCGTGCA ATCGCTGTTT
ACCGGCATAC GCCTATTTAG TTGGTTTGTT GCAATAGGCA CCATAATTGC CGGCGTTGTG
GGCGTGGGCA ATATTATGCT TATTTCAGTT AAAGAGCGAA CCAAAGAAAT AGGCATTCGC
AAAGCCTTGG GGGCAACCCC ACGCGCAATT ATTGCCACCA TATTGCAAGA ATCGATTGTG
CTTACTTTTA TTTCGGGTTA CTTCGGCTTA GTCGCAGGGG TGTTTGTTAT TGAGCTCGCA
AGTAAATTAA TGCCCCCAGC TACAACCGGC AGCAACTTTT TTAGCAACCC AGAAATAGAT
TTCACCACCG CACTCACAGC CATATCGGTA TTGTTAATTG CAGGCGCTAT TGCATCGGTT
ATGCCTGCTC AACGAGCCGC TGGCGTTAAC CCTGTGGTGG CACTGCAAGA TGAATAG
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| Protein sequence | MLQLFDTDVW QEIFDVLKRH KLRTALTAFG VFWGIFMLVV LMGAGNGLQN GAESNFTGAK
NSVFIWSGRP TSIPYKGLSR GRYIRLNDTD MEALYSRIPE IQHIAPSNGM GDRPVNHADK
TETYSLSGIQ PIEITAQGYR LEQGRFLNEL DIEQKRKVVV IGTHVRDVLF NGENPVGKTI
KTLGVRFLVV GVIAPASLAD WAQRDTRRVY FPNTTLRSTF NQRDVIHRML IAPKDGVDAA
WLEQQVQTVL KERHKIHPDD HGVIGSYNAQ KDYTRVQSLF TGIRLFSWFV AIGTIIAGVV
GVGNIMLISV KERTKEIGIR KALGATPRAI IATILQESIV LTFISGYFGL VAGVFVIELA
SKLMPPATTG SNFFSNPEID FTTALTAISV LLIAGAIASV MPAQRAAGVN PVVALQDE
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