Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2186 |
Symbol | |
ID | 3967570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2781634 |
End bp | 2782683 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637921276 |
Product | flagellar biosynthesis/type III secretory pathway protein-like |
Protein accession | YP_527658 |
Protein GI | 90021831 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGATA ACAAAAGCAA CACACATGCA CCGTTCGAGA TTATACGCCA AGAAGAGGGG GTAGAGTCTT GGGCGCCGCC CAGCATGACG GTACCTGGTC GTGTAGTACA AAGTGCAATT AAAGAAAAAA AACGCGCTAA AAACGAATCT ATTGAAGATA TTCCCCCATC CAAACGACCA CCGCCTCTAA CCGCTGATGC GCTTCAAAAA ATGGCTGCCG AGGCCAAAGA AGAGGGTTTT GCCGAGGGTA GAGCAGAAGG TCTGCAATCG GGTCACACCG AGGGATATAA CAAAGGCTTC GATGCTGGCA GTAAAAAAGC ATATCAAGAA ACATTAACCT CTATAGAAAA TGAGCGCGCG CGCTTAGCGT CTATTGCCGA AGAATTGTTG TTGCCAATGC AAAAGCAACA ACAGGATCTA GAGCAAATAG TGGTTGATAT TGCTGTGAAT ATGGCAAAAA AAATATTACA AGCCGAGATA AGCACCGACC CTTCGCTGCT ATTTGCGCTT GTAAACCGAG CCATAAATGA GTTGCCGGTA GGGGCAAAAA ATATACACGT TTCACTCAAC CAGCAAGATG CAGAGTTAAT GGCAGGTTTA GCTGAAGAAA CTGCAGGAAT TAAAGAGTGG CCAGTCCATA TAGATAACTC TTTAACATCT GGTGGTTGCC GCGTAACCAG CGATGAAAGC CTTATTGATT TTGATGTAAG TACGCGTATA GCAAAGTATT TCGACGAGGC ACGCGAGAGC GTCGAGGCTG AAGACGACGA AGATTATCCC CCAATGATCG AACGACCTGA GCCGATTGGT GATGGCAATA GAGGTTTAGC AAGCGATACT GAGCTGGAAA GAGAAAAAGC AGAAGGGGAT GAATCAGAGT TGGATTTCGT GGAAGCTGAC GGTCAGGCAG AGGACAGTAA AACAGAAGAC TCTGAAAGAG AAAGCAATAA AACAGATAGA GAAGCAGAGG CGGGTGAGGC GAGGCAAGCG TCTAAAGCGG GTAGTAGTCC TTTAAAGTCT GAAGAAGAGC CAAGCGATGA CCAGGCATGA
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Protein sequence | MADNKSNTHA PFEIIRQEEG VESWAPPSMT VPGRVVQSAI KEKKRAKNES IEDIPPSKRP PPLTADALQK MAAEAKEEGF AEGRAEGLQS GHTEGYNKGF DAGSKKAYQE TLTSIENERA RLASIAEELL LPMQKQQQDL EQIVVDIAVN MAKKILQAEI STDPSLLFAL VNRAINELPV GAKNIHVSLN QQDAELMAGL AEETAGIKEW PVHIDNSLTS GGCRVTSDES LIDFDVSTRI AKYFDEARES VEAEDDEDYP PMIERPEPIG DGNRGLASDT ELEREKAEGD ESELDFVEAD GQAEDSKTED SERESNKTDR EAEAGEARQA SKAGSSPLKS EEEPSDDQA
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