Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2168 |
Symbol | |
ID | 3967552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2763004 |
End bp | 2764203 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637921258 |
Product | hypothetical protein |
Protein accession | YP_527640 |
Protein GI | 90021813 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTT ATCAATTAGT TAGCACACTA CTAGCTTGTG GAATAGGCTT TTTAATATCC ATTAATAGCT ATAGCGAAAA CAGCGTATTA ACCCAACCTA TCGCAGAAGC CGAGCAATCG CAAAACACCG TTAAAAATTC CACCTACCTA AATGAAATAA ACGACGAAGA TATAATGGCA ATTAGCGATG AGCTAAAGGC TATTTTAGAT TTGAACGTAC GCCCTATTAA ACGCATTGAA GCAAAAACCA TTCGCTTGCA TGAAATACTG TTCGGCAGCA ACTATTACAA TATTCGCTAT GCATTTGACG ATACTCGCAT AGCCAACGAC GTATTTGAAG CAAGAACCGG TAACTGCATT TCATTGGCAG CGCTATATGT CGCCTCTGCG AGGTATGTAG GTTTAGATGC GTACTTTCAG TCGGTAGACA TAGAGCAAAC CTGGGAAAAG CGCGACGGCC ACTACGTAGT ACCGGGCCAT GTCAACGCAC GTATTGCTCA CCCAAGCAAA ACCATTGTGG TTGAATTTAT TTCCACTTAT TTCTTAGAAA CACTCTCACA AAAAAAATCA CGCAAAATTT CAGATAAGCG CGTATTTGCC GAGTTTTATA ATAATCTGGG AATGGAAGCA TTTGACGCGG GCCACTTAGA ACGTGCCGAA ACACTGCTCG CCAAGGCAGT AAGCAAAGAT AAAAAGCTAG ATTTTGCATG GTCTAACCTT GGCGTAATAT ACAAACACCA AGGCAAATTA GACCAGGCAG AAAAGGCGTA TTTAAAAGCG CAAAAACTAA ATAAACGCAA CCCTACTTTT GCCAACAACC TATATGTGTT GTATCGCGAA ACTGACCAAC ACAAAAAAGC CGAAGCGCTA GCCAAACGCG TAATTAAGTA CAATCGTAAA AACCCGTATT ATCTCGCCCA ATTAGCGCAA ACCGATATGG AAACCAAACA TTACGACAGC GCTGTAGAAC ACCCTTTAAA CGCTATAAAA ATAAAACCAG AAGAAGAGCA GTTTTATGTT GAACTCTCTA AAAGCTATTA CTACAAAGGC GATTTAGAAG GAACAAAAAA AGCATTAATT GGTGCAGCAA CTGCAGCCAA CATGCCTGAG AATCAAGCGC GCTACAACCA TAAAGTAAAA CTTATAGAGC AGTACGTTAA TGAAGCCCAA CTTAATACCT CTAGGCAAGC ACAGTTTTGA
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Protein sequence | MRIYQLVSTL LACGIGFLIS INSYSENSVL TQPIAEAEQS QNTVKNSTYL NEINDEDIMA ISDELKAILD LNVRPIKRIE AKTIRLHEIL FGSNYYNIRY AFDDTRIAND VFEARTGNCI SLAALYVASA RYVGLDAYFQ SVDIEQTWEK RDGHYVVPGH VNARIAHPSK TIVVEFISTY FLETLSQKKS RKISDKRVFA EFYNNLGMEA FDAGHLERAE TLLAKAVSKD KKLDFAWSNL GVIYKHQGKL DQAEKAYLKA QKLNKRNPTF ANNLYVLYRE TDQHKKAEAL AKRVIKYNRK NPYYLAQLAQ TDMETKHYDS AVEHPLNAIK IKPEEEQFYV ELSKSYYYKG DLEGTKKALI GAATAANMPE NQARYNHKVK LIEQYVNEAQ LNTSRQAQF
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