Gene Sde_2088 details

Gene Information

• Locus tag: Sde_2088
• ID: 3967472
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Saccharophagus degradans 2-40
• Kingdom: Bacteria
• Replicon accession: NC_007912
• Strand: +
• Start bp: 2672073
• End bp: 2672843
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637921178
• Product: hypothetical protein
• Protein accession: YP_527560
• Protein GI: 90021733

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.100249
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAAAAA TCGCACTAGC AGCAGCTTTA ATTGCGGTCC CCCACTTAGC CTCTGCAGAT 
ACAATACTCG GGCTATACGC TGGCGCAGGG ATTTGGAACA CAAGCATGGA AGGCACCGTG 
GGGTCCGATG AAGACCCAAT CACATCAAAG GAACTGGGTA TTGATAGCAA CCAAAATACA 
TTCTTCTACG CTGCCCTCGA GCACCCTATT CCACTCGTAC CCAACATTAG AATTGCACAT 
ACTGGGCTGC AAGTAGACGG CCAAGCAATA GTCTCACGCG AATTCACCCT AGATGAATAC 
ACCTTCCAAG CCGATGCTGA TACCGCAACC GAAATCGATC TAACCCATAC CGATTTCACA 
CTGTATTACG AACTGCTTGA TAATTGGGTG ACCATGGATT TAGGTATAAC CGCACGCCAA 
CTAGACGGCT ATGCCAAAGT AGAAGGCACG GTAATACAAG ATGATGTAGA AGAGCAGCGC 
ACAGAGACAG TAGATTTAGA CGTAATAGTA CCGATGCTTT ACGCCCGCGC TCAATTTGAC 
CTCCCACTTA CGGGCTTTCA TGCTGGTGGT GCTATTAACT ACATTGGCTA CGAAGAAAAC 
ACCTTTTCGG ATATCGATGT ATACGTAGGT TACTCTGCCG GCACGCTAGG CTTAGATATG 
GGGATAGATG TAGGTTACAG AAAGTTGAAT GTGACGGTAG ATGATGATGA AGAACTAACT 
GCTGATGTTT CTGTGGATGG CATTTACGCA GCACTCACCC TGCACTTTTA A 

 

Protein sequence

MKKIALAAAL IAVPHLASAD TILGLYAGAG IWNTSMEGTV GSDEDPITSK ELGIDSNQNT 
FFYAALEHPI PLVPNIRIAH TGLQVDGQAI VSREFTLDEY TFQADADTAT EIDLTHTDFT 
LYYELLDNWV TMDLGITARQ LDGYAKVEGT VIQDDVEEQR TETVDLDVIV PMLYARAQFD 
LPLTGFHAGG AINYIGYEEN TFSDIDVYVG YSAGTLGLDM GIDVGYRKLN VTVDDDEELT 
ADVSVDGIYA ALTLHF