| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2028 |
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| Symbol | |
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| ID | 3967291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2555634 |
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| End bp | 2557268 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637921116 |
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| Product | oligopeptide ABC transporter periplasmic oligopeptide-binding protein |
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| Protein accession | YP_527500 |
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| Protein GI | 90021673 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.593092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAA ACATCTGTTT TGTATTGCTT GCAACTACAC TAATGTTTGT TAGCGCATGC
AGCAAAAATA CATTAACCAA TGTGGAAAAG GGCAACCGCG ACAGCGAGCT TTATATAGCA
AATGCCGACG AGCCCGAATC GCTAGACCCC CACGTTGCCA GTGGTAGCCC CGACGCCAAT
ATTATTCTAG GCCTGTTTGA AGGCCTAGCT TCATTAGACC CGAAAACACT AGAACCCTCT
GCCGGTGTGG CTACACACTG GGACATTTCT GAAGATGGAA AGGTGTATAC CTTTTACCTA
AGGGAAAACG CAAAGTGGTC TAATGGCGAT AATGTAACCG CCCACGATTT TATCTATTCT
TGGCGACGTG CATTACAGCC AGCCTTAGCT GCAAAATTCG CCTACATGAT GTACCCCATT
AAAAACGCAG AGGCCTTCAA CACTGGTAAA CTCACCGATT TTAACGAAGT AGGTGTAAAG
GCGTTAACAG ACTACACACT CGAAATTACC CTTGCTCACC CCACCCCCTA TTTTATTTTG
CTGCTTGACC ATCATTCTTT TTACCCTGTA CATAAAGCAA CTATTGAAAA GCATGGCGAA
ATAGACAACC CCAACACACT GTGGACACGC GCAGAAAACT TTGTGGGTAA CGGCCCTTTT
ACTCTTGCCG AGTGGAAAAT CAACCAACAC ATTAAACTAG CTAAAAACCC ACACTACTGG
GATGCCAATA CAGTTAAGTT AAACGCCCTT CACTTTTTAC CCATAACCGA TCAACAAGCG
GAAGAGCGCG CATTTCGTAC AGGCCAGGTG CACCTTACAT ATTCACCACA AATGGCTAAC
GAAAAAATAG CGACCTATAG AGATAATCAC CCTGATGTTT TTCAGGCCTA CTATACCTAC
AGTAGTTATT ACTACGTGTT TAATACCAAG CGAGCGCCCT TCGACAACAT TAAAGTTAGG
CAGGCGTTCT CTATGGCTAT AGATAGGGAA TCCATCACTA AAAACGTAAC CAAAGGCGGC
GAGATCCCGA CTTTCTCGGT TATTCCACCA GACCCGCAAG GCTACAAACC CAAAGCCTAT
TACGGTTACA ACCCAGAAAA AGCCAAGCAG CTACTCGCAC AGGCGGGCTA CCCCAATGGC
AAAGGGTTTC CTACCTTTTA TATCCACTAC AATACGCTAG AAACCCACAA GAAAGTTGCG
GTTGCGGTAC AGCAAATGCT TAAAAATGTA TTGAATATTG ATGTGCAACT TCACAACGAA
GAATGGAAGG TATACCTAAG TACGCAAAAA AATCACAACT TCGATGTAAC CCGCCAAGCT
TGGATTGCAG ACTACGCTGA CCCAAGTAAC TTTTTTGAGA TATTTTTATC CTACGGCGGG
AATAACCATT CGCAATGGGA CAACAAACAA TACGATGCGT TGGTAGAAGA AGCTGCGCGC
ACAATGGATT CCGCAAAGCG CTTTGAGTTG TTTGAGCAAG CCAACAAAAT TTTGGCCGAC
GAAATGCCAA TAATGCCTAT TTATTTGTAT TCAGACATCA ACCTAGTGCA GCCCTATGTA
AAGAATTGGC ACCCCAACAT TCTGCATAGG CACCACTACA AAACAGTTTA TCTAGATCCA
CCAGAGGCAC CTTAA
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| Protein sequence | MIKNICFVLL ATTLMFVSAC SKNTLTNVEK GNRDSELYIA NADEPESLDP HVASGSPDAN
IILGLFEGLA SLDPKTLEPS AGVATHWDIS EDGKVYTFYL RENAKWSNGD NVTAHDFIYS
WRRALQPALA AKFAYMMYPI KNAEAFNTGK LTDFNEVGVK ALTDYTLEIT LAHPTPYFIL
LLDHHSFYPV HKATIEKHGE IDNPNTLWTR AENFVGNGPF TLAEWKINQH IKLAKNPHYW
DANTVKLNAL HFLPITDQQA EERAFRTGQV HLTYSPQMAN EKIATYRDNH PDVFQAYYTY
SSYYYVFNTK RAPFDNIKVR QAFSMAIDRE SITKNVTKGG EIPTFSVIPP DPQGYKPKAY
YGYNPEKAKQ LLAQAGYPNG KGFPTFYIHY NTLETHKKVA VAVQQMLKNV LNIDVQLHNE
EWKVYLSTQK NHNFDVTRQA WIADYADPSN FFEIFLSYGG NNHSQWDNKQ YDALVEEAAR
TMDSAKRFEL FEQANKILAD EMPIMPIYLY SDINLVQPYV KNWHPNILHR HHYKTVYLDP
PEAP
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