| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1914 |
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| Symbol | |
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| ID | 3966978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2415304 |
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| End bp | 2415933 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920999 |
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| Product | copper-resistance protein CopA |
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| Protein accession | YP_527386 |
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| Protein GI | 90021559 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR01621] pseudouridine synthase Rlu family protein, TIGR01621 |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.290092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGACG AACCCGGTGA GAAAGGTTTT GTTACTCTGG TGCGTACTGT ACTGGGTGAT
TCGGCGTTAT TGCCTGCCCA TCGTTTAGAT AAACCCACAT CTGGCCTATG TATATTCGCC
AAGTCTTCTG GCGCTGCAGC CCAATTTGGA CAATTGTTCG AGCGCAAACT CGTTACAAAA
TACTACCTTG CCATTACGTC TAAAAAGCCA GCAAAAAAAC AAGGGGCAAT TATCGGCGAT
ATGGTTAAAA CGCGTAATGG TAGCTGGAAG TTAACAGCGG CTAAAACTAA CCCAGCAATA
ACACATTTTT TTAGTTTCGC GCTGGCAAGT GGTATGCGGT TAATCCTGTT AAAGCCTTCA
ACGGGTAAAA CCCATCAGTT ACGAGTAGCT CTTAAAGCGC TAGGCGCCGC CATTATTGGC
GATGAGCGTT ATGGCGGTGA GCCTAGCGAT CGCTTGTACT TACATGCCTA TCAGTTAGAG
TTTGAGTTTA ACGGCGAGCG CCATTCATTT AAATGCAAGC CAACCAGTGG CGAGTTATTT
TTAAGCGAAG CGTTTAGCTC TGCGTTAATT GATATTGGCG ATGCGCCTTC TCATGCATGG
CCCACTGTAA AAAATAAAAA GCCTCTATAA
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| Protein sequence | MHDEPGEKGF VTLVRTVLGD SALLPAHRLD KPTSGLCIFA KSSGAAAQFG QLFERKLVTK
YYLAITSKKP AKKQGAIIGD MVKTRNGSWK LTAAKTNPAI THFFSFALAS GMRLILLKPS
TGKTHQLRVA LKALGAAIIG DERYGGEPSD RLYLHAYQLE FEFNGERHSF KCKPTSGELF
LSEAFSSALI DIGDAPSHAW PTVKNKKPL
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