| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1868 |
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| Symbol | |
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| ID | 3966911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2359237 |
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| End bp | 2359977 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920951 |
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| Product | heme exporter protein CcmC |
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| Protein accession | YP_527340 |
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| Protein GI | 90021513 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.995735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTTGGG AATGGTTTCA TCGCTTGGGT TCACCCCGCT GGTTTTACGA AAAAACAACT
GCTTGGCTGC CTTGGCTGGG TGCCACCTGT GTGATTATGT TGGTAGGTGG TGCTATTTGG
GGGCTGGGGT TTACGCCAGA AGATGCAAAG CAGGGCAATA GCTTTCGCAT AATATACGTG
CACGTGCCTA GCAGTATTTT GGCAATGGCT GGCTACTACG TTATGGCCAT AGCCGGTGCC
ATTGGTCTTA TCTGGAAGAT GAAGCTCTCC TTCGTAGTAA TGCGATCGGC TGCCACGATT
GGCGCCGGGC TTACCTTTCT GTCTTTGTTT ACCGGTGCCG TTTGGGGTAT GCCTACATGG
GGAACATGGT GGGAGTGGGA CGCGCGCATT ATGTTTACCT TCATTCTGCT GTTACTGTAC
TTGGGTATTA TCGTTTTACA TGAGGCCAAC CCCAGCAAAG ATGCCGCCGA TAAGGTGTGT
GCAATATTGG CCTTAGTGGG CACGGTAAAC GTACCTATCA TCTACAAGTC TGTTGATTGG
TGGTATTCGC TCCATCAGCC AGCCACAATA AAAGTGACTG ACGAGTCGAC CATTGCAGCC
TCTATGGCTT ACCCCTTAAT TGTTATGATT GTGGCGTATT ATTTAACATA TTCATGGGCT
TTGATCCTGC ATGTGCGAGC AGAAATCTTG CTTCGCGAGC GCAAAACACG CTGGGTACAA
GATTTGGTCG CGGAGAAATA G
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| Protein sequence | MSWEWFHRLG SPRWFYEKTT AWLPWLGATC VIMLVGGAIW GLGFTPEDAK QGNSFRIIYV
HVPSSILAMA GYYVMAIAGA IGLIWKMKLS FVVMRSAATI GAGLTFLSLF TGAVWGMPTW
GTWWEWDARI MFTFILLLLY LGIIVLHEAN PSKDAADKVC AILALVGTVN VPIIYKSVDW
WYSLHQPATI KVTDESTIAA SMAYPLIVMI VAYYLTYSWA LILHVRAEIL LRERKTRWVQ
DLVAEK
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