Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1853 |
Symbol | |
ID | 3966896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2343901 |
End bp | 2344638 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637920936 |
Product | methyltransferase |
Protein accession | YP_527325 |
Protein GI | 90021498 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | [TIGR00740] methyltransferase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.473649 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGACA CGTCCCAACG AGATAACATC TACGCCGCGC CACACGATAA CGTGGGTGAA TTCATCTTCG ATAAGAAGGT GGTAGATGTA TTTCCCGATA TGATCAAGCG CTCGGTACCG GGTTACAGCA CCATCATCCA CATGATTGGC CAAATGGCAG AGCGCTACGC CAAGGCAGAT TCCACTTGTT ACGACCTTGG CTGCTCGCTA GGCGCCGCCA CACTGGCTAT GCGCCACCGT ATAAGCGCTG CGGGCGTGTC TATTGTTGGG GTAGATAACT CTAGCGATAT GATCGAGCGT GCAAAACAGG TAATCGACGC CGATAGCTAC GATGTACCCG TAACCCTTCG CTGCGAAGAT ATAAACCAAA CCCCTATTAG CAACGCCTCG GTTGTGGTGT TGAATTTCAC CTTGCAATTT ATTCCTAAAC AGCAGCGCCA AAGTCTGCTG GCCAATATTT ATGCGGGCAT GAACCAAGGC GGCATTCTTA TACTGTCTGA AAAGCTTACC TTTGAAGATG CACACCACGA CGAGCTAGTA ACCGATTTGC ACCATTACTT TAAAAAAACC AATGGTTACA GCGAGTTAGA AATTGCCCAA AAGCGCACCG CGATAGAAAA CGTATTGGTA CCAGAAACCC TCACCACCCA TAAAAACAGG CTTACCGAAG TGGGTTTTCG CAGCGTAGAC CTGTGGTTTC AATGCTTCAA CTTTGCTTCA ATAGTTGCTT TTAAATGA
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Protein sequence | MDDTSQRDNI YAAPHDNVGE FIFDKKVVDV FPDMIKRSVP GYSTIIHMIG QMAERYAKAD STCYDLGCSL GAATLAMRHR ISAAGVSIVG VDNSSDMIER AKQVIDADSY DVPVTLRCED INQTPISNAS VVVLNFTLQF IPKQQRQSLL ANIYAGMNQG GILILSEKLT FEDAHHDELV TDLHHYFKKT NGYSELEIAQ KRTAIENVLV PETLTTHKNR LTEVGFRSVD LWFQCFNFAS IVAFK
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