Gene Sde_1849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1849 
Symbol 
ID3966853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2338983 
End bp2340347 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content41% 
IMG OID637920932 
Productacyltransferases-like 
Protein accessionYP_527321 
Protein GI90021494 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTTT TTATGCCAGC TCAAAATTTG GCCAAAGTTT TAGTAGCCAC TAGTAACGAC 
CTCGCCACCC CAACGATTTT TAACACTATA AGACCAATAA ACATGCGCTT CTTTCTCCGC
CCTCAAGCTA GCTGCCAATA CCTTGCCCCA CTAGACGGCG TAAGAGCTAT AGCAGTCATG
CTGGTAATCA CCTTTCATGC CTACTTTTTT TTACAGTACG GTATGGCTGA GATGAGCAAC
TTTATTGAGT TTAGCAATAG CCTACCCGCC GTTTTAAGCT GGGTACGACG CGGCGACTTA
GGTGTGGATT TATTCTTTGT GCTAAGCGCT TTTTTGATTG GCAGCCAATT GTTTTGCGAA
AACTATCAAA CAGATCACAT ATGCTTAAAG CGTTTTTACC TAAAACGTTT TCTACGTATT
TATCCCATCT ACTTATTTGC GCTGGGCATA CATGTCGCAT CCAAAGGTTG GGACCCAGCC
TTATTAGGCA ATATTTTTGC ATTTAATAAT TTAGTGAACC TAGAGAATAT AATTATCCCT
TGGAGCTGGT CGCTCTCTGT AGAGATTCAA TTTTACGCAG TGTTCCCCCT ACTAATTTTG
GCTTTAACAC GTACATCACA AGCCGTATTT TTTGCCGCAA TAGTAATACT CTTCTCGCTT
ACTTGGACAA GCTACTTCTA CTTTACAAAC CCAGTACTAC AAACCCAATC TGTAATAGAT
GTAATTGCAA ATAAAGACAA GGCTACCCAA ATTTACTACA TGCAATACTT GTATGTATCA
CCTGCCGTTC GAGCACCCGC ATTTATTTTT GGTGCCGCCG CGGCTTGGCT TTGGAACAAC
AAGCGAGAGG CTTGTACTTC TTACTACCAA CGTCACAAAA AATTGTTTTT AATAGGCAGC
ATTGCAGCGA TAGCCATAAT GGCCGTTATT AGCTCGGTAA ATATTTACCA GCCCAAGACA
ACCATGAGCA CCGTGCAAAA CACCCTATAC ACACTCAATA TGCTGTTTGG CCGTACGTTA
TTCGCCTTAT TGGCAGCGGG CTTATTACTT GTAGTGCTTA TACCCAAACA GCAAGTATCG
TTTCCCAGTC GTCTACTCAG CTCGAAATGG CTGTTCCCTA TCGCTAGGGG TAGTTACTCC
ATGTATCTAT TCCACCCTAT TTTCTTATTC GCAGCATTTG CATTGTTATT TGGCGAACAA
AAAATTAATC AAGTTAGCTT AACCCAACTG TTTGCATTAG CGGGCTTAGG CATATTGTTT
TCATTTGTTT TCAGTATTTT TACCTACTAC CTAATAGAAA AGTGGTTTAC ATTTAGCCGT
ATAGCACACT TTATAGATTC CAAAAAATCA ACCGTCGACG CCTAG
 
Protein sequence
MQFFMPAQNL AKVLVATSND LATPTIFNTI RPINMRFFLR PQASCQYLAP LDGVRAIAVM 
LVITFHAYFF LQYGMAEMSN FIEFSNSLPA VLSWVRRGDL GVDLFFVLSA FLIGSQLFCE
NYQTDHICLK RFYLKRFLRI YPIYLFALGI HVASKGWDPA LLGNIFAFNN LVNLENIIIP
WSWSLSVEIQ FYAVFPLLIL ALTRTSQAVF FAAIVILFSL TWTSYFYFTN PVLQTQSVID
VIANKDKATQ IYYMQYLYVS PAVRAPAFIF GAAAAWLWNN KREACTSYYQ RHKKLFLIGS
IAAIAIMAVI SSVNIYQPKT TMSTVQNTLY TLNMLFGRTL FALLAAGLLL VVLIPKQQVS
FPSRLLSSKW LFPIARGSYS MYLFHPIFLF AAFALLFGEQ KINQVSLTQL FALAGLGILF
SFVFSIFTYY LIEKWFTFSR IAHFIDSKKS TVDA