Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1795 |
Symbol | |
ID | 3966740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2285359 |
End bp | 2286393 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637920878 |
Product | hypothetical protein |
Protein accession | YP_527267 |
Protein GI | 90021440 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00014706 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCAA TGTTCAATTT ATATAAGCAT GCACTCCCCA AGGCCGCCAA ACTCTTTGCT GGCTCACTGG TTGTTGCCTG CGCATTTACC TCCAATACTT TTGCTCAAAC AAATTCAGAT GCCCCTTGGT ACCAAATTGA AGTCATTATT GTCGAACGAT TAACTGCCGC CGCACAAACC GAAGTCTGGC CAAAAGATAT AGTACTGGCC TACCCTGCTA AAAGTCGGTA TTTAGAATTT ATTGCGGAAG AAGAAACAAC TGACGAGCAA ATGCAAAATC AGCTTACAGC ACAAGAAGGC ACAATAGCAC CCAGCACAGT AGAAGCAGAC CTAGCCGAGA AACCTTTCAT CCCGCTAGCC ACAGCAGACC AACAGCTAAA CAGTATTGCT AAAAGGATAG CGCGCACCAA TCACTTACAC CTTTTATTCC ACCAAGCTTG GCGCCAACCT CTTACAGGCG CCGACCAAGC ACCAGCTATA GTGGTGCAAG CTGGCAAACA GTTTGACGAC CATTACGAGC TAGAAGGCTC ATTAAAAGTT AGCGTAAGCC GCTACTTACA TATAGATTCA AATTTATGGC TAACAGCCTT CGAAGCGAAT TACGGCCAAC CACAAGGACA ATGGCCAGAA CTGCCTGAAG CGCCATTTAA TGTTGCAAAT ATTGTTATCG AACAGCCTAT TAGCAACGAA TACGGTGACG ATAACGAAAA CCTACTTGGC GAAAACGTTA ATCAATCTGC AGAACCTGCA CCTTCGGAAA TCAGCTCGCA ACAGCTAGAT AGCCTACTAT TTGCTGAGCC TACTACCGAT AATCTTGGAG GCTTTAATTT TAATACAGGC ATGAAACCCG TAAATGAAGC ACCTGAGCCC GAGAAAATTA AGAATTTCGT GGTTACACAA ATCGTAACTT TGCAGCAGCA GCGAAGAATG CGAAGTGGAG AACTTCACTA TATAGACCAC CCCAAATTAG GCCTACTAGT GAAAGTAACA CCATACGACC CCAGCGCATC GAGTGGCGCA GAAGAAACAC AATAA
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Protein sequence | MKPMFNLYKH ALPKAAKLFA GSLVVACAFT SNTFAQTNSD APWYQIEVII VERLTAAAQT EVWPKDIVLA YPAKSRYLEF IAEEETTDEQ MQNQLTAQEG TIAPSTVEAD LAEKPFIPLA TADQQLNSIA KRIARTNHLH LLFHQAWRQP LTGADQAPAI VVQAGKQFDD HYELEGSLKV SVSRYLHIDS NLWLTAFEAN YGQPQGQWPE LPEAPFNVAN IVIEQPISNE YGDDNENLLG ENVNQSAEPA PSEISSQQLD SLLFAEPTTD NLGGFNFNTG MKPVNEAPEP EKIKNFVVTQ IVTLQQQRRM RSGELHYIDH PKLGLLVKVT PYDPSASSGA EETQ
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