Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1771 |
Symbol | |
ID | 3966677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2260831 |
End bp | 2262408 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637920854 |
Product | hypothetical protein |
Protein accession | YP_527243 |
Protein GI | 90021416 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTCGGC AACTAAAAGC GTTCACGCTG TCACCGGCGT TTATAGGGCT ATGCATAGCG CTTAGCTTTT TTTTGGGCCT GGGTTGGGTG CCCCTTTTCG ATTTAGATGA GGGCGCCTTT ACAGAAGCTA CCCGCGAAAT GCTCGAAAGC GGTATTTATT CTGCCACTTA TCTCGATGGC GAGCCGCGTT ACGACAAACC CATTTTATTC TATTGGATAC AAGCTACTAC TGTATCGCTA TTTGGGTTTA ACGAATGGGC TTTTAGGCTG CCTTCGGTAC TTATGGCCAG CCTATGGGCT TGGGCGTTTT ATCAATTTTG CGTGCAATTT ATTGGGCGCA CACGCGGTAC CATTGCCACT CTATTTTTAG TTAACTGCCT TTGGGTTGCG CTTATTGCGC GAAGCGCCAT TGCCGATGCA ACACTTAACC TCTTTTTATC GCTTACCTTT TTTGATATTT GGCGATACTT CAACCAACAA AAACCCGCTT ACCTTTACCG TGCATACCTG TGGATGGGCC TAGGCATGCT CGCCAAAGGG CCGATTGCTG TGGCTGTGCC ATTAGTGGTG TCGGTGCTGT ACCTTATTGT AAGTAAAGAG CGCGCACAGC TTTACAAAGC ATACTTCAAC CCAATTGGCT GGGTTATTTG TATTGCTACG GTATTACCGT GGGTTATTGC GGTTTCTATT GAGCAAGGCA CAGGGTTTTT CTACGGCTTT ATTGTAGAGC ACAACTTAAA ACGGTTTTCG TCTACCCGCG AAAACCACGG CGGCTCGTTG CTGTACTTTG TTTTCGCCCT ACCTTTAATT TTATTACCCC TCAGCGGCTT AATTCCTAGA GTGGTACAAA AAGCTAAAGC GCTGTGGCAG GACAATTTAA ACCGCTTTTT AATTCTTTGG TTTGCAGTGG TTTTCTGCCT GTTTTCTTTT TCTAAAACAC AGCTCCCCCA CTACATCCTT AACGGCTGCG TACCTCTGTT TATTCTGTTT GCGCGGCAAT CGGTAATATT TAGCCGTTGG CGACTAACGA CCATCGCCCC CATTTTAGCA ATGGCACTAT TCACCGCTCT CCCTTGGCTT ATCCCTGAAT CCAACCCAGA AAGCACGCGC TTTGACGAAG CCACTCTTTC GCGCTTCAGC GAGGTGTACT TTCCTGCTTA TACATGGCTA GCAGCAGCGG CACTGGCCAT TGTGATTGGC TTAGCCCTAT TGCCTCGCTT AGCCACATGG CAACGCTTGG TGTTAAGTGG CGTAGTGATA AATATTTTTG TATTCACGGT ATTGGTAAAA ATAATCTCTG GGTTACAACA AGCACCCATC CACCACATGA TTAGTTTTAT TGACAAGCAA AATACTAACA CGCAGGTTGT TGCCTACCGC ATGCATATGC CCTCATTTAG TGTGTATCGC GAAAAAATCA CACCACTGCG CGCACCCGAA GCAGGCGAAT GGGTAATGAC ACGTGTAGAT CGCGTTGAAC GCCTACGCGA AGATACCCAA GCTAAAAATA TCGAGCTCAC TAAACTCCAC CAGTCTGGTG GCCTTGTACT GTTTAGTGCC AGCCAGTCCC AACAGTAG
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Protein sequence | MIRQLKAFTL SPAFIGLCIA LSFFLGLGWV PLFDLDEGAF TEATREMLES GIYSATYLDG EPRYDKPILF YWIQATTVSL FGFNEWAFRL PSVLMASLWA WAFYQFCVQF IGRTRGTIAT LFLVNCLWVA LIARSAIADA TLNLFLSLTF FDIWRYFNQQ KPAYLYRAYL WMGLGMLAKG PIAVAVPLVV SVLYLIVSKE RAQLYKAYFN PIGWVICIAT VLPWVIAVSI EQGTGFFYGF IVEHNLKRFS STRENHGGSL LYFVFALPLI LLPLSGLIPR VVQKAKALWQ DNLNRFLILW FAVVFCLFSF SKTQLPHYIL NGCVPLFILF ARQSVIFSRW RLTTIAPILA MALFTALPWL IPESNPESTR FDEATLSRFS EVYFPAYTWL AAAALAIVIG LALLPRLATW QRLVLSGVVI NIFVFTVLVK IISGLQQAPI HHMISFIDKQ NTNTQVVAYR MHMPSFSVYR EKITPLRAPE AGEWVMTRVD RVERLREDTQ AKNIELTKLH QSGGLVLFSA SQSQQ
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