| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1770 |
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| Symbol | |
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| ID | 3966676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2258260 |
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| End bp | 2260698 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920853 |
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| Product | glycosyltransferase |
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| Protein accession | YP_527242 |
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| Protein GI | 90021415 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAACA ATTCGGCTTT ATCTATTACC ACTATACGCA CATCGCTTTG CGCTGCATGG
CAAAACTATC AAGCGCTAAT TGCAAGCGCA CGTATTGCCC AACCAGTAGG CTTTAGTAAA
GCCCATAGCT TAGTAGCGGG CCTAGCCGTT GTATTATTTA CCATTGCAGC TATCGTATAT
TTTACCAATG GGCATCACGC TGGGTTTCTT GCGATTAACA ACTGGGGGCG CTTCTTACCC
TCCTTTGTAC TGCAACTAAT AACCGTTTGG GGCGATGGCG TTTTTGTGCT TTGTTTAGCC
CTTTTATTTT TGCCGCGTAA TATTCAAGCG CATTGGGGTA TATTTTTAGC TGCAATTATC
GGCGGCATAG TATCGAACGT TTCTAAAGAT TACTTCGATG CCCTGCGCCC ACCCGCAGTA
TTTACCACCG ATTTATTCAA CTTAGTGGGT AAAGGCTATA CCAATCACAG CTTCCCTTCT
GGCCATTCAC TTACCGCTTT TTTAGCAGCC ACACTGTTTT TTCACTATTT AAACAGTGTA
AAAATGCGCT GGCTCTTTTT TGTAGCAGCC GCTTGCGCAG CACTTAGCCG CGTATTAGTT
GGCGTGCACT GGCCAGTAGA TACACTTGTT GGTAGTGGCT TAGGTATTTT ATGTGCATTA
GCCGGTATTT ATATTGCCAA CAAAACGCCA AGAGCCATTA ATAAATATAG CCATGGGTTT
ATTTTATTTT TACTGGTAAC AGCTTGCGTA TTATTGCTTG TAGAGAAAAA CGATTACCGC
CTAACACTAC CCGTCTTGTA TGTAGCCTCC ATAGTTACAC TGTGGCGAAC GTTTAAACAT
TACATTGCAT GCCCCGGAGC CAAAGCACTA GCAGCCAACA ACATAAAACT AAGCAACACC
TCCGCGTCGG TTTGGTTTTA CAGCTTGCTC GGCCTGCTAA CTGTTTATCG CTTAGCGGTT
ATATTCCAAC CCCACTTGGG CTTATTCTAC GACGAAGCTT ACTATTATCA TTGGGCGCTC
AACCCAGATT TTGGCTACTA CTCCAAACCG CCAATGGTAG CGTGGGCGAT TATTATCAGC
ACATCCATTC TAGGTGACTC TATATTTGCG GTTAAAAGTA TGGCCGCAAT TTTGTATGCC
GGTGCAGCCA TTTTCATCTA TAAAACCGCG CAAAAACTTG TAGATAGCTG GGCAGGTTTA
ATTGCCGGCA TTATATTTTT ATGTATCCCA ATGGTGGGGT TTAACAGCGT TTTTATTACA
ACCGATGCCC CCATGTTTTT CTTTTGGTCT GCTGCGCTAT ATGTATTTTT TATCGCATTA
GAAACCAATA AGTTAAGCCA CTGGGTGCTT TTGGGCTTAG CTACCGGCGC AGGCATGCTA
AGTAAATACA CCATGGGCGC CCTGCCCTTG GGGTTATTTT TATTCCTACT GTTTAACGCA
AACACTCGCC CTCGCCTATT AACGGCTGGC CCGTGGGCTG CCGCTATAGT TGCCGGTTGC
GTATTTGGCT TAAATATTTA TTGGAACATG ACCAATGGCT GGGTAGCACT ACATCACACG
CAAGAAATTT CTCAGGCCTC CGAGAATACC GTTAGCTTTA GCTCACTATT TGTTTTTCTG
GCAACACAAC TGCTTATATT TGGGCCAGTA TGGAGCTATT TAGGCCTAAG ATTATGGCTA
GGCAAAGCCA GCACAACCGC CGTTATAAAA ACGGAGTATT GGCAGGCCTT GGTATTTACA
ACTTTTACTA TTTTGGTTGC TATTTCACTG CAGGCATTTA TTTCTAGAGC GTTTGCCAAT
TGGGCTGGCC CTTGGATGAT TGGCGGCTCG CTGCTTGTTG CTGTACTGTG CCGAGCCAAC
CAACTGCAAT ACCAAGCAGG CTCTGGCAAT GCTCTTAGTA AAACATGGCT CGCGCGTGGC
GCGGTTGCGC ATTTACTTTT GCTATCGGCT TTTTTCCATT TCCCACAAAT GCTTAATGCG
TTAGATATAA CACCAAGTAA AAAGAACGAC CCCTACCACC GTGTGGCAGG TTGGAATGAA
TTGGGCGCAC AGTTAAAGCC CATACTAGCG CAATACCCAA GCGCTAAGCT CGCGAGCGAA
TCCAGAGATA TTTTGGCCTA TTTAGGCTAC TACGCCGCCC CGGGTAGTTT CGAGTTTGCT
CGCTGGAATC CAAACCAAAA TAATATTCGT GACTATTACG ACCTAAAAGT TAACCTGCGT
GAGTGGCAAG GGCCAGCGTT TAGCAATCAA CAATTTATTT TTGCTACCCG CGCACCACTA
CCCCAAGAAA CGGCTAATAG TTTTAACAAA GTAACAAAGC TTACCGAAAT TAACGCCGCC
CCCTACGCAG ATATGCCAAT GAAGGTTTAT GTGTACCTAC TTGTGGGCTT TAACGGTTAC
CCAGCTAGTG CACAAAGCGA GGTTGATGAT GCAAATTAA
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| Protein sequence | MTNNSALSIT TIRTSLCAAW QNYQALIASA RIAQPVGFSK AHSLVAGLAV VLFTIAAIVY
FTNGHHAGFL AINNWGRFLP SFVLQLITVW GDGVFVLCLA LLFLPRNIQA HWGIFLAAII
GGIVSNVSKD YFDALRPPAV FTTDLFNLVG KGYTNHSFPS GHSLTAFLAA TLFFHYLNSV
KMRWLFFVAA ACAALSRVLV GVHWPVDTLV GSGLGILCAL AGIYIANKTP RAINKYSHGF
ILFLLVTACV LLLVEKNDYR LTLPVLYVAS IVTLWRTFKH YIACPGAKAL AANNIKLSNT
SASVWFYSLL GLLTVYRLAV IFQPHLGLFY DEAYYYHWAL NPDFGYYSKP PMVAWAIIIS
TSILGDSIFA VKSMAAILYA GAAIFIYKTA QKLVDSWAGL IAGIIFLCIP MVGFNSVFIT
TDAPMFFFWS AALYVFFIAL ETNKLSHWVL LGLATGAGML SKYTMGALPL GLFLFLLFNA
NTRPRLLTAG PWAAAIVAGC VFGLNIYWNM TNGWVALHHT QEISQASENT VSFSSLFVFL
ATQLLIFGPV WSYLGLRLWL GKASTTAVIK TEYWQALVFT TFTILVAISL QAFISRAFAN
WAGPWMIGGS LLVAVLCRAN QLQYQAGSGN ALSKTWLARG AVAHLLLLSA FFHFPQMLNA
LDITPSKKND PYHRVAGWNE LGAQLKPILA QYPSAKLASE SRDILAYLGY YAAPGSFEFA
RWNPNQNNIR DYYDLKVNLR EWQGPAFSNQ QFIFATRAPL PQETANSFNK VTKLTEINAA
PYADMPMKVY VYLLVGFNGY PASAQSEVDD AN
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