| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1758 |
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| Symbol | |
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| ID | 3966664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2245538 |
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| End bp | 2246701 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637920841 |
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| Product | putative ABC transport system permease protein |
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| Protein accession | YP_527230 |
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| Protein GI | 90021403 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGATT TATATTTGGT GTTTAAAAAC TTAACGCGCA ATAAATTGCG GCTAATACTC
AGCTGCTTTG CCATATTTAT TGCTTTCTTG TTGTTTGGGG TGCTTGGCTC GGTGCAAAAG
GTATTTGATA GCGGCGAAGA GGCTTCGTCA GATACGCGCC TAATGGTAGT AAACAAAATT
AACTTTACAC AGCCGCTGCC AATTGCATAC GTAAATAAAA TTAAAGCCAT AGAAGGCGTG
GCAAGCGTGA CCTATGCAAA CTGGTTTGGT GGTTATTACA AAGAGCAAAA AAATATGGTG
CCTACCTTCG CGGTAGATCA AGATACCTAT TTTGAAGTGT ATAACAACTT TGTTGTTGAC
CCCGCACAAT TGCAAGAATG GCAAAATACC CGTACGGGGT TGATGGTAGG TCGAGTTACC
GCTAACCAGT GGGGCTGGAA GGTAGGCGAT AAAATAAGCT TGTCGTCTAA TATTTTCTCG
CAAAAAACGG GCGGCCAAAC ATGGGAATTT AATATTGTAG GTATTTTTGA TGGTGAAAAC
CCTCAGGTAG ATACCTCTGG TGCGCTGTTG CACTATAAAT ATTTTATAGA AACCCAAACG
TTTGGCAGTG ATTGGGTAGG GTGGATTCCG CTCAATACTA CCGAAGCAGC ACTTAACGAT
TCAGTTGCTA GTGCCATTGA CGAGCAATTT GCTAATTCCC CCGCCGAAAC TAAAACCAGC
ACCGAAGCGC AGTTTGCCAA GGCCTTTATA GAGCAGTTAG GCAATATAGG GTTTATCCTA
ACCTCTGTAG TCTCTGCGGC ATTTTTTACT ATTTTAATGA TTGTGGCCAA CACCATGGCG
TTGGCTGTTA GCGAACGTAC TAACGAAATT GCAGTGTTAA AAACCCTTGG GTTTAGTGCT
AAACGTATAT TTGGCCAAGT GCTTAGCGAA AGTTTGTTAC TAAGTATTAT TGGTGGGTTG
TTTGGTTTAG GTTTGGCGGC GCTTTTGGTA ACCGGTGCAG CGCAGGCACC GCAGCTAAAA
AGCTTTTTAC CTACGCTAAT GTTCCCTACA GAAATTTGGT TAAAAGGCTT TGCCTATATG
TTGTTACTTG GGTTCGTTAC TGGGTTCTTC CCAGCTTATA ACGCGATGAA ACTGAAAACC
ATTGATGCAT TAAATAGGAG CTAA
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| Protein sequence | MSDLYLVFKN LTRNKLRLIL SCFAIFIAFL LFGVLGSVQK VFDSGEEASS DTRLMVVNKI
NFTQPLPIAY VNKIKAIEGV ASVTYANWFG GYYKEQKNMV PTFAVDQDTY FEVYNNFVVD
PAQLQEWQNT RTGLMVGRVT ANQWGWKVGD KISLSSNIFS QKTGGQTWEF NIVGIFDGEN
PQVDTSGALL HYKYFIETQT FGSDWVGWIP LNTTEAALND SVASAIDEQF ANSPAETKTS
TEAQFAKAFI EQLGNIGFIL TSVVSAAFFT ILMIVANTMA LAVSERTNEI AVLKTLGFSA
KRIFGQVLSE SLLLSIIGGL FGLGLAALLV TGAAQAPQLK SFLPTLMFPT EIWLKGFAYM
LLLGFVTGFF PAYNAMKLKT IDALNRS
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