| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1756 |
|---|
| Symbol | |
|---|
| ID | 3966662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 2243684 |
|---|
| End bp | 2244775 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637920839 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_527228 |
|---|
| Protein GI | 90021401 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0637221 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGCC AAAGTGAAGC GCAACCTAGT AAAAGTGAAC TTTTACAGCA GTTAAAAATA
GATAAGCAGG CACCCGCGCC AGCCGGTTTT AGTGGCAAAC AATTAATAGC TACAGGTGTT
GTGTGTGCGT TACTAGCTGG TGGGTTAACG TATTTATTAG CGCCAACAAG TCCTTCCGCA
GTAAACCCAA AAAGCACTAG CGCAATATCG CTGGCGCAAG CTTCTGGAAA TACAGTAAAA
GATTCCGCTG TAAACACCGG TAAAAGCGGT AGCGAAAAGA GTGGTTCCTC GTCAAAAAGT
ATTTACGCCG ATAAAACAGA AGTGCTTAAC GCTTCGGGTT ACGTAACGCC GCGTTTAATT
GCCACTGTGT CTGCAGAGAC AATGGGCCTA ATTAAAAGCG TGCAGGTAGA AGAGGGCATG
AAAGTAGAAA AAGGCCAAGT ATTGGCAACG CTCGACGATG CTGTGGCGCA AGTTAACCTT
AAGTTGGCGC AAGCCCAGCT TAATGCGCAG TTAGCGCGAT TAGAATCCAT GCAAACCGAC
TTAGACGAAT CGAACCGTGT TCTAAAACGT GTTAAGCAAA TGGCATTAAG CGGCTTTTCT
AGCGATGCCG AAATTACCCG CGCGCAAACC AATGTAGACA AGCTCAGCTC TGGCTTAACC
AGTGCAATAG CAGATGTAGA AGTAGCACGT ATGCAATATG CAGCGCAAAA AGAGCGGGTA
GACGACCACA TAATTCGCGC CCCGTTTTCT GGTGTCGTCA CCGTTAAAAA TGCTCAGCCT
GGCGAGATAG TATCGCCAAG TGCGGCGGGT GGTTATACGC GTACCGGTAT TTGCACCATT
GTAGATATGG ATTCACTCGA AATAGAAGTG GATGTAAACG AAGCGTTTAT TCGCAAAGTT
GTAGCCGATC AGCCGGTTAT AGCTAATTTA GATGCCTATC CAAATTGGGA TATCCCCGCG
CGCGTAATAG CCATTATTCC AGCAGCAGAT AGAGCAAAAG CCACAGTGCG CGTACGTATC
CGTATAGATG AAAAAGACGA ACGCATCCTA CCGGATATGG GCGTAAAAGT TACTTTATTC
GAAAAAGATT AA
|
|---|
| Protein sequence | MTGQSEAQPS KSELLQQLKI DKQAPAPAGF SGKQLIATGV VCALLAGGLT YLLAPTSPSA
VNPKSTSAIS LAQASGNTVK DSAVNTGKSG SEKSGSSSKS IYADKTEVLN ASGYVTPRLI
ATVSAETMGL IKSVQVEEGM KVEKGQVLAT LDDAVAQVNL KLAQAQLNAQ LARLESMQTD
LDESNRVLKR VKQMALSGFS SDAEITRAQT NVDKLSSGLT SAIADVEVAR MQYAAQKERV
DDHIIRAPFS GVVTVKNAQP GEIVSPSAAG GYTRTGICTI VDMDSLEIEV DVNEAFIRKV
VADQPVIANL DAYPNWDIPA RVIAIIPAAD RAKATVRVRI RIDEKDERIL PDMGVKVTLF
EKD
|
|---|
| |