Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1712 |
Symbol | |
ID | 3966499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2187471 |
End bp | 2187866 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637920793 |
Product | CBS domain-containing protein |
Protein accession | YP_527184 |
Protein GI | 90021357 |
COG category | [K] Transcription |
COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTCAA TTTTGGTTCG TGACTATATG GATCGCAATC CACACGCTAT TAATCAGCTA GCGAGTGTGC GCGAAGCCAT TGGAGTACTC GTCAACGAAG GTATTACTGG GGCACCAGTT ATTGACGACT CTAAAACACT AGTGGGGTTT ATTTCAGAGC ACGACTGCAT CCGGCAACTA TTAAACGATG CCTTTTACTA TGATGAATCC GCAGCAATCG GCGCTATTAT GCGTACAGAT TTAAAGAGCG TAACGCCAGA TACCTCCATA CTCACCATTG CAGAAGCCAT GGCTAACGGC CCCCCCAAGA ATTACCCTGT TGTTGATAAT GGCAAGCTTG TTGGGCTTAT TTCTAGAGCA CACGTATTAA GAGCACTGCT CACCGTTAAC GATTAA
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Protein sequence | MHSILVRDYM DRNPHAINQL ASVREAIGVL VNEGITGAPV IDDSKTLVGF ISEHDCIRQL LNDAFYYDES AAIGAIMRTD LKSVTPDTSI LTIAEAMANG PPKNYPVVDN GKLVGLISRA HVLRALLTVN D
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