Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1649 |
Symbol | |
ID | 3965165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2115151 |
End bp | 2116377 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637920730 |
Product | MDO-like protein |
Protein accession | YP_527121 |
Protein GI | 90021294 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATGC TAATACATAA TTCGGGGCGA CTCGATTACC TTGATGCTGC ACGAGCTTTC GCACTGATAC TTGGCGTGGT ATTTCATGCA AGCCTTTCTT TTATGCCCAT GTATATTGGC TGGGCCGTTA TGGATGTGTC TACTAGCTCG TTAGTGTCCT TTTTTGTGTT GGTTAGTCAT TCATTTCGAA TGCCGCTTTT TTTTCTTATT GCTGGATATT TTAGCCATGC GGTATTGCAT CGCGATGGAG CAGGGCGCTT TCTTCACTCT CGTTTTATAA GAATTGTTGT ACCGTTTATT GTGGCTTGGT TTGTATTGCG ACCTCTGTTG GTATCCGGTT GGATAATGGG TGCAGAAAGT ATGCGCGGTG AAGCGAATGT ACCAAATGCT TTGTTGGGCG GTTTTGCTTC TTTATCTTCG CTGCCGACAG GTATTTTTAC AGGTACACAT TTGTGGTTTC TCTATGCGCT TATTTGGATA ACGCTTTGCG TATTGCTATT GCGATGTATC GTGAGCTGGC ATAAGGGTAT ATATACTCGC GTTGCAGCGG TTTGCACGAC AGGAATGCGC TGGGCGAGCC AGTCGCAAAT GGCGCTGTGT GTGTTGGCTA TTCCTACTTC TGGTTGTTTA TGGTTTATGA GCCATTGGGG AATGGAAACG CCAGATAAAA CATTGGTGCC CCACGCCCCA ACTTTTTTCA TCTATGGTGG CTTTTATTTA TTCGGTTGGT TGCTGAATAA AGATCGCTCG CTGCTTGACG GTTTTGCCAC GCTAACGGTA ACGAAATGGC TATTGTGTGT TGTCGCTGTG GGTGTAGCTT GTTTCTTATC TAAATTCGAA GCGCAAAAGG CCCATAGCCT GTATGTGTTG TTCAAAGTTG GCTTTGGCTT GGCTTACGCG CTTATGATGT GGTCGCTGGT GTCTATTACT CTTGGTGTTT TCCGGCGGTT TTTTAATAAA ACGAGCGCTT ATGTACGCTA CCTTGCGGAT GCCTCTTACT GGCTTTACTT AATTCATCTT CCTATTGTTA TTTGGCTGCA AATTGCTTTT GCAGAGTTGC CTTTGCATTG GTTGGTTAAG CTAGGTGCTA TTTCGGGTAT TACTGTGGCT ATTTCACTTT TACTCTATGA GCTATTTGTG CGCTCTACGT TTATTGGTGC GGTGTTGAGC GGTAAGCGCA AGCCCCGCGC TTGGAGCGCT ATTATGCCCG TACAGCAACC GCGCTAA
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Protein sequence | MNMLIHNSGR LDYLDAARAF ALILGVVFHA SLSFMPMYIG WAVMDVSTSS LVSFFVLVSH SFRMPLFFLI AGYFSHAVLH RDGAGRFLHS RFIRIVVPFI VAWFVLRPLL VSGWIMGAES MRGEANVPNA LLGGFASLSS LPTGIFTGTH LWFLYALIWI TLCVLLLRCI VSWHKGIYTR VAAVCTTGMR WASQSQMALC VLAIPTSGCL WFMSHWGMET PDKTLVPHAP TFFIYGGFYL FGWLLNKDRS LLDGFATLTV TKWLLCVVAV GVACFLSKFE AQKAHSLYVL FKVGFGLAYA LMMWSLVSIT LGVFRRFFNK TSAYVRYLAD ASYWLYLIHL PIVIWLQIAF AELPLHWLVK LGAISGITVA ISLLLYELFV RSTFIGAVLS GKRKPRAWSA IMPVQQPR
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