Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1634 |
Symbol | |
ID | 3965189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2097666 |
End bp | 2098292 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637920717 |
Product | thymidylate kinase |
Protein accession | YP_527108 |
Protein GI | 90021281 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.60217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCTA CTGGAAAATT TATTACCGTT GAAGGCACAG AAGGTGTCGG TAAATCGACA AATATCGAGC TTATAAAAAC ACTGCTTCAG CAAGCGGGTA TAGAGCTTGT AGTAACCCGC GAGCCTGGCG GAACACCACT GGCGGAAGAG TTGCGCAATG TACTGTTGGC TAATAGAGAC GAAAACTTCG ACCCCTTGGC CGAGTTGCTA GTGGTATTTG CCGCGCGAGC ACAGCATATA AACCAAGTAA TAAAACCTGC GTTAGCCGCC GGTAAATGGG TGTTAAGCGA TAGATTTACC GATGCGACTT TTGCCTATCA AGGCAAGGGG CGTGGCTTAC CTATACAGGC TATATTGCAG TTAGAGCAAA TGGTACAGCA GGGCTTGCAG CCAGATGCGA CTTTTTTGTT AGATATAGAT GTGCAGGTTG GCCTTGAGCG CGCCCGTGAG CGCGGCGAGC TAGATCGATT TGAAAACGAG CATATAACTT TTTTCGAAAA AGTACGTGCC GGTTACCACG AGCGAGTTGC CGCTACGCCA GAAAGGTTTA TGGTAATTAA TGCCGGCCAA TCATTAGAAG CTGTACAACA AGATGTAACG CTCGCGGTAG AAAAGCTTCT CGCCTAA
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Protein sequence | MISTGKFITV EGTEGVGKST NIELIKTLLQ QAGIELVVTR EPGGTPLAEE LRNVLLANRD ENFDPLAELL VVFAARAQHI NQVIKPALAA GKWVLSDRFT DATFAYQGKG RGLPIQAILQ LEQMVQQGLQ PDATFLLDID VQVGLERARE RGELDRFENE HITFFEKVRA GYHERVAATP ERFMVINAGQ SLEAVQQDVT LAVEKLLA
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