| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1599 |
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| Symbol | |
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| ID | 3965666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2055728 |
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| End bp | 2056045 |
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| Gene Length | 318 bp |
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| Protein Length | 105 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920680 |
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| Product | sigma 54 modulation protein, putative |
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| Protein accession | YP_527073 |
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| Protein GI | 90021246 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00000251677 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCCAA ATGCAGACGT GGTTTACCGC GATTTAGACA CCTCACCTGC ACTGAATGAT
GTTATCTATA AGAAAATGGA GAAGCTGCAC CGCTATTCAG ACTCCATAAT TCACAGCAAG
GTTGTGTTAG ACAGCCCCCA CAACCAGAAG CACAAAGGCA AACTCTACCG AGCCTCTATT
GAAATTGGCT TGAAAGGCCA TCCGCTCACT GTGAGCCAAG ATGCCCCTAA CGTGCATATT
GCCGTAAGAG ACGCTTTTGC CGCTGCTGAA CGAAAAATCA AAGAAGACAA CAGCAAACGC
CGCCCAACAA GACATTAA
|
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| Protein sequence | MKPNADVVYR DLDTSPALND VIYKKMEKLH RYSDSIIHSK VVLDSPHNQK HKGKLYRASI
EIGLKGHPLT VSQDAPNVHI AVRDAFAAAE RKIKEDNSKR RPTRH
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