Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1586 |
Symbol | |
ID | 3965653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2036809 |
End bp | 2038956 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637920667 |
Product | ribonuclease E and G |
Protein accession | YP_527060 |
Protein GI | 90021233 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATTC GCGCCATTAA GGGTTTGGCT AAATCTATAA AGAATAAAAA GCGAACAATA ATTCGCAGTA TTGTCGCGGT TTGGTTGGTG TTATTCATTG CTTTACTGGG CGGTAAGGCA TATCAGCACT TAGATCAACA CGAGTCTCGG GGCGCCATTG CCGTAGAAAA TGGCCATTTT GGTGAAAGTT ACCCCACACC TATTTATTTA GATCAAGGCT GGGATCGCTC AGATAGCCTT TGGTTTTACA ATACCACGCA GGGCTCGGCG TTATTGCCAT ACGACTTCTT TTTAGAGTTA GAGTTACCAG CAGTGGAATC AACAGAAAAA CTGCGCGATA TAGCGACAAT AGATAAGTAT CGCTATTTAC CTCAGGATGA ATCTTTCTTT AACCCCGATG GTTTACCTCT AGGCTTTGTA AAAGACACCT ACAAAGGTGA CGATTACGTA GGCTACACCT GTGCTGCGTG CCACACAGGC CAAGTTAACT ATACCGACGA GAAAACCAAC AAGCGCTACG CGATTCGCAT CGATGGCGGC CCAGCTATGG CCGATATGGT TGGTTTTTTA ATGGAATTGG AAGCATCTAT GGACGCAACG CTTAAGAATA CAACTAAGCT CGACCGCTTC GTTGATAATG TACTTAAGCG CAACAATGGT TATTCCGACC GCGATGACGT AATTAAAGAT TTAGAAAAGT GGACCTTAAC CATGAAGCAG TACAACATGG TTAACGAGTC GGATGTAGAG TACGGCTACG CGCGACTGGA TGCATTTGGG CGCATATTTA ACCGTGTTTT ACAGCATGTG TTAAACAAAG AGCAAGCGAA GCGAGCCTTG TTATTGGCGC ATGATGAAAA CGGCGATCGA ATTTTAACCG AGGCTGAGGT TGAGCTGGTA TTAAAAGATA TTACCGACCC CACGGTAATT GGTAACGAGC AATTTGCATT GGTGTTGCGC AACTTAATGT CTACCGAGCC TGGCTACCCA GGGTTGACTA AAGATGAGCT TACTATTTTA AAAGATGTGT TCTTCAATAT ACCTAACGCA CCTGTTAGCT ACCCGTTTAT GTGGGACATT ACTCATTCCG ATTATGTACA GTGGAATGGT TTAGCGAATA ACGCATCGGT TGGGCCATTA GGTCGTAACG TGGGTGAAGT GATTGGTGTA TTTGGTATTC TCGATTGGAA AGCCAAAGAC CCGGGTTTTA GTATTTCGGC TAAGTTATCT GGCCAGAGCA AAAACAAACC TCAGATTGAC TTTCAATCTT CTATTCGCCA TACCAATTTG CGTCGTTTAG AAAATCAATT GAAAACGTTG AAGTCACCTG AGTGGCCGGT TGAAATTTTT GGCGAGTTGG ATGAAAAAAA GGTTAAGCGT GGCGAATTAA TTTACGCCGA GTATTGCCAG TCTTGTCACG AAATTATTGA TAGAAATAAT TGGGACCGTA TTGTTATTGC CAATATGTCT AACCTCGATA GCGTAGGTAC AGACCGTAAA ATGGCCGAGA ACAGTGTTAA CTACACGGGT AAATCGGGTA ACTTTAAGTA CACTTATCAA GCTACCGATG CGGGTACCAT AGTGCTTGGT GAAGAAGCGC CGGTAGCGGC GTTACTGACT GCAGCTACTA AAGGTGTAGT GGGTACACCA GAGGCCGACA AGTTATTTAT TCGCCGTTGG TTAGATTGGT TGTATAACTT AGCTAGCTCA TTTTTTGAAA ATGAAATTAA AGCAAGCGTA AAAGCTGGAG ACTACTTCCC AGATACAACC GGTAAGCCTT ATGATTCATT GCTTGCATAT AAGGCGCGCT CTTTGAATGG TATTTGGGCT ACCGCACCCT ACTTACATAA TGGCTCGGTA CCTAGCTTGT ACGATTTGCT GTTGCCGGCA AAGTGCGACC CGGAAAATGG TGTTATGGAA TGTAGACCAG CAACATTTGA AGTGGGCAGC CGAGAATTTG ATAAAGTAAA AGTGGGTTTA AAATATGAAG GCTACGGCGG TACCGTATTT GATACCAGTG TTGAGGGTAA CTTCAATACT GGCCACGAAT ATGCCGCGGG TAATACTGCA CTGCCTAATG GCGAGGAGCT TAAGCCGTTG AATAAACAGC AGCGTTACGA CTTGTTAGAA TTTATGAAAA CACTTTAA
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Protein sequence | MIIRAIKGLA KSIKNKKRTI IRSIVAVWLV LFIALLGGKA YQHLDQHESR GAIAVENGHF GESYPTPIYL DQGWDRSDSL WFYNTTQGSA LLPYDFFLEL ELPAVESTEK LRDIATIDKY RYLPQDESFF NPDGLPLGFV KDTYKGDDYV GYTCAACHTG QVNYTDEKTN KRYAIRIDGG PAMADMVGFL MELEASMDAT LKNTTKLDRF VDNVLKRNNG YSDRDDVIKD LEKWTLTMKQ YNMVNESDVE YGYARLDAFG RIFNRVLQHV LNKEQAKRAL LLAHDENGDR ILTEAEVELV LKDITDPTVI GNEQFALVLR NLMSTEPGYP GLTKDELTIL KDVFFNIPNA PVSYPFMWDI THSDYVQWNG LANNASVGPL GRNVGEVIGV FGILDWKAKD PGFSISAKLS GQSKNKPQID FQSSIRHTNL RRLENQLKTL KSPEWPVEIF GELDEKKVKR GELIYAEYCQ SCHEIIDRNN WDRIVIANMS NLDSVGTDRK MAENSVNYTG KSGNFKYTYQ ATDAGTIVLG EEAPVAALLT AATKGVVGTP EADKLFIRRW LDWLYNLASS FFENEIKASV KAGDYFPDTT GKPYDSLLAY KARSLNGIWA TAPYLHNGSV PSLYDLLLPA KCDPENGVME CRPATFEVGS REFDKVKVGL KYEGYGGTVF DTSVEGNFNT GHEYAAGNTA LPNGEELKPL NKQQRYDLLE FMKTL
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