Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1540 |
Symbol | |
ID | 3965068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 1986830 |
End bp | 1987195 |
Gene Length | 366 bp |
Protein Length | 121 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637920618 |
Product | ATP-dependent helicase HrpB |
Protein accession | YP_527014 |
Protein GI | 90021187 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATTA TTAGATACAT ACTTGGACGC ATAATCCTGC TATTGGATTG GCTTTTTACC CCCAAAAGCG TAAAACGCGA CCCAGAGCTG CAAGCACAGC TAGACCTAAA GATGGCGAAC TATACCTTAT ACCAATACCT TGCATGCCCC TTTTGCGTAA AAGTACGCCG CGCACTAAAA CGCAATAGCC TTTTGGTAGA AACTCGAGAT GCAAAACGCT GCGAGACGAC AAAGAAAGAA CTTTTAGAGG GTGGCGGTAA GCTAAAAGTA CCCTGCTTAA GAATTGAGGG TAACGATGGC AGCGTGAGCT GGCTTTACCA GTCATCCGAT ATTATTCATT ATTTAGAAGC GCAAATACCG CGCTAA
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Protein sequence | MAIIRYILGR IILLLDWLFT PKSVKRDPEL QAQLDLKMAN YTLYQYLACP FCVKVRRALK RNSLLVETRD AKRCETTKKE LLEGGGKLKV PCLRIEGNDG SVSWLYQSSD IIHYLEAQIP R
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