| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1535 |
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| Symbol | |
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| ID | 3965063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1979911 |
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| End bp | 1980900 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637920613 |
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| Product | hypothetical protein |
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| Protein accession | YP_527009 |
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| Protein GI | 90021182 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAAA ATATAAGTTT TTTCTTTTTA GTTAGCTTGC TGGAGCGGGC GCATCAATGC
GCGCAACAGC AGGCAAGCTC TGTTGTGGGG CAGTTGGGTA GTGACAGCCA ACCACAGGAT
GAATCCCTTC GGTTTAAAAC TAAATACGAC CTTGCTTTTA GAGCTTCCTC CATTGCCAGT
GTTAAGCCTG CAGCGGGTGA GGGCGGCGGT GTAATAAATA AGTATTTGGT GGTTGTTAAT
TTTATTGGGC TTGCCGGCGC TGCAGGAGTG TTGCCTTTAC ACTACACGCG TTTAATTATG
GATCGTCTTA AACAACGCGA TAAGGCAATG GCCGACTTTT TGGATATTTT TCATCATAGA
TTGGTATCGC TATTTTATCG AGCCTGGCAA AAATATAAGT TTACAGCGCA ATACGAAGCT
AGCTTGGTGC TAGGAAAGAA GGACGTATTT AGCACTGTTA TAGAAAGCTT GGCTGGAGTT
AGTGAGCAAG AGCGTTTTGA GTTACAGAGC TACTACGCTG GGCATTTTGC CAAAAAAGTT
CGCACGGTTA GCTCCCTACG AGCTGTTCTG ATGGATTATT TTGGGTTGCC AGTAGAGGTG
AATAGTTTTA AAGGGCAGTG GCTGCAAATA GAAAAGCGCG ATCAGTTTTG CCTTTCTTCT
AAGGCTAAAA AGCAACGACT TGGTGCAGGC ATATTACTAG GTAAAAGATG TTGGGATGTG
CAAAGTAAAA TTGAGATAGA CGTAGGCCCT ATGTCTCTCG AGCAATATCA ACGAAAAGGG
CCTGGTACAG AATTTTTTAA AAGTGCCCGT AAACTTATGA ACCGGTTTTT GCCGGCGCAC
ATTAATGCTG ATATGCATTT CAAAGTGGAG AATAAGGCCG ACTTTAGTCT GCCGCTTGGA
AAAGGATTAC GCCTGCAGCG CAACGGTTGG TTAAAAAGCA CTAAAAAAGA CCCACTTATC
GCTACGGTAT CAATTAATAG GAACGAGTGA
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| Protein sequence | MDKNISFFFL VSLLERAHQC AQQQASSVVG QLGSDSQPQD ESLRFKTKYD LAFRASSIAS
VKPAAGEGGG VINKYLVVVN FIGLAGAAGV LPLHYTRLIM DRLKQRDKAM ADFLDIFHHR
LVSLFYRAWQ KYKFTAQYEA SLVLGKKDVF STVIESLAGV SEQERFELQS YYAGHFAKKV
RTVSSLRAVL MDYFGLPVEV NSFKGQWLQI EKRDQFCLSS KAKKQRLGAG ILLGKRCWDV
QSKIEIDVGP MSLEQYQRKG PGTEFFKSAR KLMNRFLPAH INADMHFKVE NKADFSLPLG
KGLRLQRNGW LKSTKKDPLI ATVSINRNE
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