| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1441 |
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| Symbol | |
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| ID | 3966158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1860778 |
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| End bp | 1863303 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920518 |
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| Product | Outer membrane receptor proteins mostly Fe transport-like |
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| Protein accession | YP_526915 |
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| Protein GI | 90021088 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.877786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAA TTCGCTTCTT TCTTATCGTC TGCATGGTTC ATACCTGCCT GCCACCGGCT
GCGCTAGCAA GTACAAATAT AATGGGGGCG AATTCGCAGC GTTACTTCGA CTTGCCCGGC
CAACCTTTGC AAACGGGTTT AATTGAGTTT GCGTTGCAAG CAAATGTAAC TGTAATTGCA
GAGCAGGGCC TAATAGCGCA GTACCGTTCT GGCCCTGTGG TAGGGCCTAG CACTATAGAT
AACGCGTTGC GGCTATTACT AGCAGAAGCG CCACTCCAAT TTGAATATAT AGAAAGTGCA
GCTGCTTACG TTATTCGGCC TGTTGCGGTG CAGCAAAGTG TTAGCGCAGA ACCGACAGAA
ATAGTCATTC CAAGTATTGA TGAAATACTG GTTGTAGGCT CCCAATATCC GTTTAGGTAT
AACACCATTA CCAATACCCA ATTGCATGGT GCCGTGCCGT ATTTCGATTC TTCTCGTTTT
TTGAATGTAA TACCGCAATC GCTTATTCGC GATCAGCAAC CGCAATCCCT AGAAGACGTA
TTGAAATTTG CTAGTGCCAT TACCCCCGGT GACGGTATTA GCGATAGTAA TGACGATGTT
TATTTACGGG GTTTTCAGCG CCACGCAATG TATTTAGATG GCTTTAGGCT CGGCGACAGC
AGTGGCGTTC GACTACTACC GGCAGGCATA GAGCGGGTAG AGATTTTAAA AGGCCCGTCC
ACCATTCATT ACGGCCAAGC AGAGCCGGGT GGCATTGTGA ATGTTATTCG CAAAAAGCCC
AAAGCAGAAA CGTTCAGTCA GGCGCAATTG ATCGCTGGGG ATATGGGGCG GCTAGGGGTA
AGTGTTGATG TAAATAGGCC CTTGCTCAAT ACCAATAAGG CGAATTACCG GGTCATTTTT
GTAGATGATC AGCAGCAGGA GTCGGGTGAT ATTCTTAATA TTCACCGCCA GTTGCTGTCT
AGCTCAATCG CTTGGCAGCC AAGTGCAAAT ACCACTGTTG ATGTGGGTTT CGAATATCAA
AAGGCCAGCC AAGAGTGGGA TAGAAGCTTT GAAGTATTTA CTGAGTTCGG CAATATTTTC
CCCCATCGAT CGATGGCAGA TGTAGCCAAA CAAGCGCGCC CAGGTTTTAC GGCTCACTTC
AATTTATTCA GCGCTGAGGT AAATCACTAC TTTAACCCCA ACTGGCAGTT ACAGCTAAAA
GCAAATTTGT TACAGGAATA TCGCTACGGT GTTCGCACAA CAACAGATAG CTATTTAGAT
GATCGTGTGC TTTTAAACAC CGAAGGTCTA GGGCCAGATT TTGCATTGTT TATTCTGGGT
AGCCAAACGG TTTTGCCGCT TATTGTGGAG CAACACGATG GGCTTTGGCA CTATGGTTTA
GGGCCCATTC GAAGTATTTA CGATCAAGAT GACGTAGAAT TGGATAGCGG TTTTAGTGCG
AAATTAGAGG GTAGTTTTGA TACCGCTAAC TTAGAGCATA ACCTTTCGCT AGGAGTAGAT
TGGCACACGC AAAATATTAC AAAGCGCTAT ATTGTAGAGC GCAGAGATAT TGCACTTGGA
CAGCGTTGGG ATGCATTTGA ATTTGAAGCC GCCTTTGCAG AACTTGCGCA AACATTATTT
ATTGAAGACC GGCCACTGGG CGAGCTTGAA GAATATGCGA AAGAGTTAGA TTACTCAGAC
TTTGGCGCAT TTGTACAAGA TAGCGTTGCA CTTACCGATG AGTGGTTAGT GTCTGCAGGT
GCGCGTTACA TTGTTACCCA AGCAGATGTA AACGATATAA CCCTGAATAC AGCGACGCAG
CTAAAAACCT TTAAGCACTT ATCCACCCAA GCTGGCGTAG TGTACAAACC CAACCACGAT
CACTCTGTTT TTGCCAATTA CAGTGAAGCG CTGCGTGCGA ATTATATTTT GGATGATATA
GGGTCCCAAA TCACCGAGCC GGAATTATCG AACCAATATG AAGTAGGGCT AAAGTCTTAT
TGGTTGGGTG GTGATGTGCA AACGAGTGTC GCTGCGTATC ATATTAATAA ATGGAATGTT
GTTGATGTGC AAGTTGTAGA GGGGTACCGC ACAGCGTTAA GCGGCGCTAC TTACGAGGTG
CAAGGCATAG ATTTCGATTT AAGTGCGCAG GTTAGCCCAA AGCTAAATGT ACTTTTGGCG
GCATCTGTAA TCGACCCAAG TATAACGGAT GGGAGCAACA CCGGAAATTT ACCCAAAATG
GCTGCAGAGC AAACTTCCAG TGTGTTTACG CACTACCAGC TTAATAGTAA GCTAGATTTT
GTTGCCGGCT ATAAATTCGT AAGTGAACGT TATGCCGATG ATGCCAATAC CTTTAGACTA
GAAGCCTACG GCACATTCGA TGCCGGTGTT AGTTATACCT TTCAGTTAAA TGGCTTGCAT
GCCAAGTGTA ACTTGTCTGT TAAAAATTTA TCTGATGTGC CGTACATCAC TGCCGTCGAT
AGAGGGGCTC GCGTGAACGA GTCGGCAGGT AGAACTATTT CCGCCAGTTT TCAGGTAACG
ATGTAA
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| Protein sequence | MKIIRFFLIV CMVHTCLPPA ALASTNIMGA NSQRYFDLPG QPLQTGLIEF ALQANVTVIA
EQGLIAQYRS GPVVGPSTID NALRLLLAEA PLQFEYIESA AAYVIRPVAV QQSVSAEPTE
IVIPSIDEIL VVGSQYPFRY NTITNTQLHG AVPYFDSSRF LNVIPQSLIR DQQPQSLEDV
LKFASAITPG DGISDSNDDV YLRGFQRHAM YLDGFRLGDS SGVRLLPAGI ERVEILKGPS
TIHYGQAEPG GIVNVIRKKP KAETFSQAQL IAGDMGRLGV SVDVNRPLLN TNKANYRVIF
VDDQQQESGD ILNIHRQLLS SSIAWQPSAN TTVDVGFEYQ KASQEWDRSF EVFTEFGNIF
PHRSMADVAK QARPGFTAHF NLFSAEVNHY FNPNWQLQLK ANLLQEYRYG VRTTTDSYLD
DRVLLNTEGL GPDFALFILG SQTVLPLIVE QHDGLWHYGL GPIRSIYDQD DVELDSGFSA
KLEGSFDTAN LEHNLSLGVD WHTQNITKRY IVERRDIALG QRWDAFEFEA AFAELAQTLF
IEDRPLGELE EYAKELDYSD FGAFVQDSVA LTDEWLVSAG ARYIVTQADV NDITLNTATQ
LKTFKHLSTQ AGVVYKPNHD HSVFANYSEA LRANYILDDI GSQITEPELS NQYEVGLKSY
WLGGDVQTSV AAYHINKWNV VDVQVVEGYR TALSGATYEV QGIDFDLSAQ VSPKLNVLLA
ASVIDPSITD GSNTGNLPKM AAEQTSSVFT HYQLNSKLDF VAGYKFVSER YADDANTFRL
EAYGTFDAGV SYTFQLNGLH AKCNLSVKNL SDVPYITAVD RGARVNESAG RTISASFQVT
M
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