| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1296 |
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| Symbol | |
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| ID | 3965317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1685641 |
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| End bp | 1686471 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637920370 |
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| Product | M24/M37 family peptidase |
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| Protein accession | YP_526770 |
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| Protein GI | 90020943 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.492814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0068339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGATTAT TAATTGTTCT ATTGTTATTA CCGTGTTTGG CGGTTGTTGC TGCGGAGCAG
TCTTCGCAGA AAGTTGAATC TATAACGTTG CTAGATACGC TTACCCAGGG GGCTATGGTT
CGAGGGCAGG TGAACGTTAA AGCTGGGGTC GAAGTATTAG GGCGCAGCCT TCGAATAGAT
GATGAGGGTT ATTTTGTGTT TGGCCTAGGG CGAGATGCCG AGCCAGAGCT AACAATCCTT
ATTCATCATA CCAACGGTAA CACCGAGAAA AAGACCTATT CCGTGCTGCA GCGCGAATAC
GACATTCAAT ATGTTGAAGG GGTTGCGAGC AAATATGTCT CGCCGCCGCC TGAGGTAAGT
CAGCGCATTG CAAATGATGC GGCCATGGTT AAGGCTGCGA GAGCAGAATC TAGGCCTGTA
AGTGACTACC GCAAAGGCTT TGACTGGCCC GTAACAGGGC GAATTTCCGG AGTGTATGGT
AGTCAGCGAG TTTTCAATGG TGTGCCTAAG CGGCCGCATT ATGGGTTAGA CATAGCCCGT
CCTGTGGGCA CGCCCGTGGT GGCTCCCGTA GAAGGGCTCG TTACGCTTGC TGAGCCAGAT
CTCTACTATT CAGGTGGCAC AATTATTATC GACCATGGTG ACGGAATTTC CTCTACCTTT
ATACACCTAA GCAAAATAGA TGTAGCTAAA GGACAGGTGG TAGCAAAAGG AGACAAAATA
GGGGAGGTGG GTGCGACTGG TCGAGTTACA GGCCCGCATT TGGATTGGCG TATTAACTGG
TTTGAGCACC GCTTAGATCC CGCGCTAGTA TTGCCCCCTC AACCGGAGTA A
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| Protein sequence | MRLLIVLLLL PCLAVVAAEQ SSQKVESITL LDTLTQGAMV RGQVNVKAGV EVLGRSLRID
DEGYFVFGLG RDAEPELTIL IHHTNGNTEK KTYSVLQREY DIQYVEGVAS KYVSPPPEVS
QRIANDAAMV KAARAESRPV SDYRKGFDWP VTGRISGVYG SQRVFNGVPK RPHYGLDIAR
PVGTPVVAPV EGLVTLAEPD LYYSGGTIII DHGDGISSTF IHLSKIDVAK GQVVAKGDKI
GEVGATGRVT GPHLDWRINW FEHRLDPALV LPPQPE
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