| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1024 |
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| Symbol | |
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| ID | 3967778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1307097 |
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| End bp | 1307978 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637920091 |
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| Product | ribosomal protein S6 |
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| Protein accession | YP_526498 |
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| Protein GI | 90020671 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGC AGAAAACGGG GCTTTTGAGT TTATATTTTG GTATTTTTTT GATGAGCCTT
ACCGGCTTAT TCGCCAAATC GATTCCGCTT GACGCCACAT CTATCACCCA ACTTCGCAGC
ACCGTAGCTA TAGTCGCCTT ATTTATTTAC TGCATGCTGC GCGGCTCATC GCTTCGTTTA
AAGTCGTTTA AAGAAGCTGC TGGTATATAT GGGCTGGGCA TTTTTATGGC CATCCACTGG
GTAACCTACT TTCACGCCAT GCAGGTTTCA ACTGTGGCTA TTGGTATGTT GTCGCTGTTT
AGCTACCCGG TTATCACCGT ACTGCTTGAA CCATTATTTC AGAAAAAACT GCCCGCCCGC
GCCGATCTAA TAGCCGGTGC ATTGTCTTTT ACGGGTGTGG TTATTCTAAC TATGGATGAC
TCTACCGGCT TAGGTGGTGC TGCGCTAACG GGCGCTGCAT GGGGCATTTT TAGCGCTTTG
ATATTTTCTG TTCGCAATAT ACTGCAAAAA TATACCTACC CAGATGTGCC CAGTGGCACC
TTAATGTTTC ATCAGGTGGT GGCCACCGCG GTAATACTTA TACCCTTCGT AGATTTTGGT
TCTGTGGCCA GCCTAGAATT AGATAAGTGG GCACTCATTG TCGCCCTAGG TGTGCTGTGT
AGCTCTATGG CGCACACTCT GCTGGCGCTA AGCTTAAAAC GCTTACCAGC TAAATCTGTA
GCGCAAATTA GTTGCTTACA GCCCGTGCTT GGGGCGCTAC TTGCTTGGTT TGTGCTAAAA
GAAACCATTG CACCGCAGGT GCTTGGCGGC GGCGCACTAA TTCTTGCGGT GGCCGCATGG
GAATCTTACA AACAATCCTA TAGGCCTAGA GCGGTTAGCT GA
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| Protein sequence | MNPQKTGLLS LYFGIFLMSL TGLFAKSIPL DATSITQLRS TVAIVALFIY CMLRGSSLRL
KSFKEAAGIY GLGIFMAIHW VTYFHAMQVS TVAIGMLSLF SYPVITVLLE PLFQKKLPAR
ADLIAGALSF TGVVILTMDD STGLGGAALT GAAWGIFSAL IFSVRNILQK YTYPDVPSGT
LMFHQVVATA VILIPFVDFG SVASLELDKW ALIVALGVLC SSMAHTLLAL SLKRLPAKSV
AQISCLQPVL GALLAWFVLK ETIAPQVLGG GALILAVAAW ESYKQSYRPR AVS
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