| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0949 |
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| Symbol | |
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| ID | 3965344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1229763 |
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| End bp | 1230557 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637920016 |
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| Product | gluconate 5-dehydrogenase |
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| Protein accession | YP_526423 |
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| Protein GI | 90020596 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000161447 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTACTC AACTATTCGA TTTAACCGGC AAGGTTGCCC TTGTAACTGG TGCAACCCAC
GGGTTGGGCA TGTCTATGGC TGTTGGCTTA GGTAAAGCCG GCGCCACGCT GGTTATTAAT
GGCCATTCCA GCCAAGAAAA AATTGATAAA GCGGTAGAGC TTTATAAAGA ACAAGGCATT
AACGCATACG GTTACCGCTT TGATGTAACC AGCGAAAACG AAGCGGAAGC CGCCGTAGAA
AAAATAGAAA GCGAAGTGGG CCCCATCGAT ATTCTGGTAA ATAATGCCGG TATTATTCGC
CGCATCCCCT TGCTAGAAAT GCCTCTAGAC GAATGGGAAA ACGTTATTAG AACCGACTTA
ACCGGCGTGT TCATTATGAC TAAGCCCGTC GCCCAACGCA TGGTTAAACG TCGTCAGGGT
AAAATTATTA ACGTGTGTTC CATGATGAGT GAGCTAGGCC GTAACTCGGT AGGCGCATAC
GCCGCAGCCA AAGGCGGGTT AAAAATGCTT ACGCGTAATA TGGCTACCGA ATGGGCGAAG
CACAATGTGC AGGTAAACGG TATTGGGCCA GGTTATTTTG CAACAAGCCA AACCGCCCCA
ATTCGCGTGG ATGGCAACCC ATTTAACGAG TTTATTGTTA ACCGTACACC CGCTGGCCGC
TGGGGCGACC CCGATGACTT ACAAGGCACA ACAGTGTTTT TAGCATCTAA CGCCAGTAAT
TTTGTTACCG GCCAAATCGT GTATGTAGAT GGCGGTATTC TCGCCACCAT TGGCAAACCC
TCTAACGAAG AGTAA
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| Protein sequence | MSTQLFDLTG KVALVTGATH GLGMSMAVGL GKAGATLVIN GHSSQEKIDK AVELYKEQGI
NAYGYRFDVT SENEAEAAVE KIESEVGPID ILVNNAGIIR RIPLLEMPLD EWENVIRTDL
TGVFIMTKPV AQRMVKRRQG KIINVCSMMS ELGRNSVGAY AAAKGGLKML TRNMATEWAK
HNVQVNGIGP GYFATSQTAP IRVDGNPFNE FIVNRTPAGR WGDPDDLQGT TVFLASNASN
FVTGQIVYVD GGILATIGKP SNEE
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