| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0916 |
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| Symbol | |
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| ID | 3965552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1181559 |
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| End bp | 1182341 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637919978 |
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| Product | Baf family transcriptional regulator |
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| Protein accession | YP_526390 |
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| Protein GI | 90020563 |
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| COG category | [K] Transcription |
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| COG ID | [COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor |
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| TIGRFAM ID | [TIGR00671] pantothenate kinase, type III |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00129811 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000016025 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAACTCT ATGTAGATGC TGGTAATACT CGTACCAAAT GGCGACTAGC CGATGGTCGG
GAAGGGGTTG TAGCGTCTGA TGATATTTCG GGTATGGAGC GGTCGTTTGC TTTGCTCGCA
GGTGTTGTAA CCGGTGTTTT CGTTTGCTCT GTATTGGGGG AGGCTTTTAA TCGACGATTG
GAGGCCTTAT GTGGGCAATT GTTTGGTGTG CCTCCGCATT TTGCGCGTGT AAAGCAAGGG
GTGTTGGATA TTGTGCCTGC CTACGAGCGG CTGGATACCC TTGGGGTGGA TCGTTGGCTG
GGGTTGGTGT TTGCTCGTTC TCATGCCAAA TCGCAATGTA GCGTCGTTGT GGGGGCGGGA
AGCGCGTTAA CGGTCGATTT ACTCGATGCG CAAGCCTGTC ATCTGGGTGG GTGGATCGCG
CCTGGTTGCG CTTCAGTTGA GGCTGCATTG GGTGGAAAAG TCCAGTTTGC ACGCTCAGAG
GCTTATTTAA AAGCCCTGCA AAGTGATGGT GCGTTAACCC CGCCTCAGAC CTCGGCGTTT
GGATCGAGTA CAGTGGCGTG TGTTCAGGCC GGTGTGGATG CAATGATCCG CGGCTTCCTG
CAGCAGGTAA TTGCTTGTGC CGGCACTGAA TTTGGTGGGC GCGAAGCGGT ATATTTTCTC
GCTGGAGGAG ATTCGCCGCG AGTTGAGGCT ATGCTTAGAG AGCTTGATCC CAATTTAGAG
TTGGTTCTGT CGCCTGCAAT TGTGCTGGAT GCCTTGGTTT TGTGGTCTGA GTGGTGCGCT
TAA
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| Protein sequence | MKLYVDAGNT RTKWRLADGR EGVVASDDIS GMERSFALLA GVVTGVFVCS VLGEAFNRRL
EALCGQLFGV PPHFARVKQG VLDIVPAYER LDTLGVDRWL GLVFARSHAK SQCSVVVGAG
SALTVDLLDA QACHLGGWIA PGCASVEAAL GGKVQFARSE AYLKALQSDG ALTPPQTSAF
GSSTVACVQA GVDAMIRGFL QQVIACAGTE FGGREAVYFL AGGDSPRVEA MLRELDPNLE
LVLSPAIVLD ALVLWSEWCA
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