| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0913 |
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| Symbol | aspS |
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| ID | 3965549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1177409 |
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| End bp | 1179193 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919975 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_526387 |
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| Protein GI | 90020560 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000846052 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000230652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGCAGTG TTTACTGTGG CGTAGTGAAT ACGTCAAATA TTGATCAAGA AATTACCCTA
TGTGGTTGGG TGGACCGTCG TCGCGATCAC GGTGGTGTGA TTTTTATCGA CCTGCGCGAT
AGGGAAGGTA TTGTGCAAGT GGTTTTCGAC CCCGATGCCG CAGATAAATT TGCCTTGGCC
GATAAGGTCC GCCCAGAATA TGTGCTGCGC GTAACCGGTA AGGTTCGCGC TCGCAGCGAG
GCCACTGTTA ACGCCAATAT GGCCACTGGT CAAATTGAAG TATACGGCAC CGATTTAGAG
ATTTTGAACT CAGCTGAAAC GCCGCCGTTT CAGTTGGATG AGCACACCAA TGTTGGTGAA
GATGTACGCT TAAAGTACCG CTATTTGGAT TTGCGTCGCG ATGCTATGCA GCAGCGTTTA
AAATTCCGCT CTAAAGTAAC CAACGCTATT CGTAACTATT TAGACGATAA CGACTTTTTA
GATATCGAAA CACCTATTCT TACGCGCGCA ACACCAGAAG GTGCGCGCGA TTATTTGGTG
CCTTCGCGCA CCCACGATGG CAAGTTCTTT GCGCTTCCTC AGTCGCCACA ATTATTTAAG
CAGTTGTTAA TGGTGTCTGG TTTTGACCGT TACTACCAAA TCGCCAAGTG TTTCCGCGAT
GAAGATTTGC GTGCAGATCG TCAGCCAGAA TTTACTCAAA TCGATATTGA AACTTCATTT
ATGGATGAAG AGCAAATTAT GTCGGTTACC GAGGGGATGA TCAGCAAGTT ATTCCGCGAG
CTAAAAGGTG TCGAGTTGGG TGAGTTTCCG CGCATGCCTT ACGCAGAAGC AATGGAAAAA
TACGGCTCAG ATAAGCCTGA TATGCGTATA CCACTAGAAA TGGTGGAAAT TAAAGATTTA
ATGGCATCGG TAGATTTCAA AGTATTCTCT GGCCCAGCCA GCGACCCGAA AGGGCGTGTT
ACTGCAATGA AAGTACCTGG TGGCGGTGAG ATTCCTCGCA AGAAAATAGA TGCTTACACC
AAGTTTGTTA GTATCTACGG TGCAAAAGGT TTGGCTTACA TTAAAGTTAA CGACAAGACC
GACCTTGAAG GTGGTTTGCA GTCGCCAATT GTTAAGTTCT TACCGCAAGA TGTATTGCAA
GCATTGCTTG ACCGTTTAGA AGTAGAAAAT GGCGATCTAA TTTTCTTTGG CGCCGACTCC
GCTAAAGTGG TTACCGAGGC TTTAGGTGCG TTGCGCTGTG AATTGGGTAA AGATTTGAAC
CTTTACACCT GTGAGTGGGC ACCGCTTTGG GTTGTGGATT TTCCAATGTT TGAAGAGTTG
GAAGATGGTT CGTTAACCGC GTTGCACCAT CCTTTTACAG CGCCTTCTTG TTCTCCTGAA
GAGCTTTCTG CTAACCCTGC AACAGCGCTT TCTCGCGCAT ACGACATGGT ACTGAATGGT
ACCGAGTTGG GCGGTGGTTC TATTCGTATT CACGATCAAT CCATGCAGCA GGAAGTATTC
CGTGTGTTGG GTATAGGTGA AGAAGAGCAG CGCGAAAAGT TTGGCTTCCT GTTGGATGCA
TTGAAGTACG GTGCGCCTCC CCATGGCGGT TTGGCGTTTG GTTTGGATCG CTTAATCATG
TTGATGACCG GTGCGTCTTC TATACGTGAT GTTATTGCCT TCCCTAAAAC ACAGTCGGCG
GCATGTGTAA TGACTGACGC ACCTGGTGCG GTAGATAAAA AACAGTTGGA AGAATTGCAT
ATCCGTTTGC GTCCTGTTGT AGCGCAGCCT AAAGAGCAAG GCTAA
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| Protein sequence | MRSVYCGVVN TSNIDQEITL CGWVDRRRDH GGVIFIDLRD REGIVQVVFD PDAADKFALA
DKVRPEYVLR VTGKVRARSE ATVNANMATG QIEVYGTDLE ILNSAETPPF QLDEHTNVGE
DVRLKYRYLD LRRDAMQQRL KFRSKVTNAI RNYLDDNDFL DIETPILTRA TPEGARDYLV
PSRTHDGKFF ALPQSPQLFK QLLMVSGFDR YYQIAKCFRD EDLRADRQPE FTQIDIETSF
MDEEQIMSVT EGMISKLFRE LKGVELGEFP RMPYAEAMEK YGSDKPDMRI PLEMVEIKDL
MASVDFKVFS GPASDPKGRV TAMKVPGGGE IPRKKIDAYT KFVSIYGAKG LAYIKVNDKT
DLEGGLQSPI VKFLPQDVLQ ALLDRLEVEN GDLIFFGADS AKVVTEALGA LRCELGKDLN
LYTCEWAPLW VVDFPMFEEL EDGSLTALHH PFTAPSCSPE ELSANPATAL SRAYDMVLNG
TELGGGSIRI HDQSMQQEVF RVLGIGEEEQ REKFGFLLDA LKYGAPPHGG LAFGLDRLIM
LMTGASSIRD VIAFPKTQSA ACVMTDAPGA VDKKQLEELH IRLRPVVAQP KEQG
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