Gene Sde_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0883 
Symbol 
ID3968817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1141596 
End bp1141886 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content45% 
IMG OID637919945 
ProductBvg accessory factor 
Protein accessionYP_526357 
Protein GI90020530 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0234] Co-chaperonin GroES (HSP10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000200777 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000120487 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATTC GTCCTTTACA TGATCGTGTT GTGGTTCGCC GCAAAGAAGA AGAGGCTACT 
ACTGCATCTG GTATTGTTTT ACCTGGTTCT GCTAAAGAAA AGCCAAACCA AGGTGAAGTA
ATTGCCATCG GTTCTGGCCG AGTGTTGGAT AGTGGTGATG TGCGTCCATT GGACGTAAAA
GTGGGTGACG TTGTGGTATT CGGCAAGTAC GCCGGTAGCG ACACTATCGA AGTAGATGGT
GAAGAGCTGG TAATTCTTAG CGAATCCGAC ATTAAAGCGA TTGTGGAATA A
 
Protein sequence
MKIRPLHDRV VVRRKEEEAT TASGIVLPGS AKEKPNQGEV IAIGSGRVLD SGDVRPLDVK 
VGDVVVFGKY AGSDTIEVDG EELVILSESD IKAIVE