| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0881 |
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| Symbol | |
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| ID | 3968815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1139763 |
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| End bp | 1140833 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919943 |
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| Product | alanine racemase region |
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| Protein accession | YP_526355 |
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| Protein GI | 90020528 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3137] Putative salt-induced outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.140785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000185996 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGTTTCA CCATACCACG TTACACTTCT AATTATAAAA CTGCTTCCCC TTTGAAAAAA
TTATTTATTC GAATAGGTGT TTTAGGCACA TTGCTTATGG CAGCCAATAC TTGGGCTGGC
CAGTTAACCC TAGTGAATGG CGACACCATT AAAGGCGAAA TCTCGTCGAT CAACGAAACA
CAGGTTATTT GGCAGTCTGA CTTGCTGGGT GAGCTTCGCA TAGCCAAAAC CAACGTGAAG
AATATGAAAA GCTCTATGGC GTTAAAGTTA CGCGGCGAGC GAGAGCCGTG CTATTGGGCT
GACTTAGAGG ATGACCTCGC GCAATTTGCC TGCGATGACG GCTCGTTAAC CGACATTCCA
TTTTTGGCCA TCGAAGAAAT TGTGCGCTTC GAAGGCTACC GCGATACCTT ACACCAATAT
GCGGGTAAGT TGACGATCGT GGGCTCGCAG GCCACTGGTA ACAAGCAGCA GCAAGATTGG
GTGATCGACA CAGATGTAAC CATGCGGCAC GCTGACTTTC GCCATGAAGT GGGTTTGAAG
TACGAGCAAG AGTCGGTGAG CCTTGGGCCG CTACTGCACG AAGCTGAAGC GCAATACTCG
CTAGATTGGT TTTTCAAGCC ACAATGGTTC TGGTTTGCAG ATTTAAGCGC GCTAATGGAC
GAGACCAAAA ATATCGAGCA AAAAGCCACG TTAGGCTCTG GGGTGGGTTA CCAGTTTTGG
GAGCGCCAGC GCAGCGCGCT ATCTATCGAG CTGGGTGCTC AGTATGCCGA CGAAAAGTTT
GATGCCAGTA TTGTTGAGCA AGACACTCGG CAAACGGGTT CTTGGCGAAT TTCAACCAAT
TACCGCTATC AGTTCCCTCT CTCCATTGCG CTTTACCATA AGAATAAATT CCTGCAATCG
TTGGATAATG GCCAGCAGTG GGAAATAGAT TCAGAAACGG GCTTGCGCAT GCCCATTGGT
AAAAGTGTTT CTGCCGACAT TAAATACGAA TACGACTACG ATAACCTGCC GCCAGAGGGC
ACAGTAAAGG AAGATTCCAT GCTGCGTTTT GGTTTGGGCT ACGCCTGGTA G
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| Protein sequence | MGFTIPRYTS NYKTASPLKK LFIRIGVLGT LLMAANTWAG QLTLVNGDTI KGEISSINET
QVIWQSDLLG ELRIAKTNVK NMKSSMALKL RGEREPCYWA DLEDDLAQFA CDDGSLTDIP
FLAIEEIVRF EGYRDTLHQY AGKLTIVGSQ ATGNKQQQDW VIDTDVTMRH ADFRHEVGLK
YEQESVSLGP LLHEAEAQYS LDWFFKPQWF WFADLSALMD ETKNIEQKAT LGSGVGYQFW
ERQRSALSIE LGAQYADEKF DASIVEQDTR QTGSWRISTN YRYQFPLSIA LYHKNKFLQS
LDNGQQWEID SETGLRMPIG KSVSADIKYE YDYDNLPPEG TVKEDSMLRF GLGYAW
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