| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0864 |
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| Symbol | |
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| ID | 3965213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1121089 |
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| End bp | 1121508 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637919926 |
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| Product | peptidase S49, protease IV |
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| Protein accession | YP_526338 |
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| Protein GI | 90020511 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAG TTCAACAAGG TTTTACTCTA ATCGAATTAA TGATCGTGGT AGCGATTATC
GGTATTTTGG CTGCAATCGC GTTACCTGCG TATAACGATT ACACCACTCG TGCAAAAGTT
TCTGAAGGTA TTGGTTTGGC TGCTGCAGCT AAGTCTGCGG TGAGTGAGTA TCGTATTTCT
TTGGCTGCAT ACCCCACAAA CAACACTCTT GCTGGTCTTC CTACTCAGAT TGCTAGTAAA
TATGTATCGA GTGTGAATGT TGGAGCTGGA GGTATAATTA CTGTGGGTTA TAAGGCTGCT
GCAGGTGTTA CAGCTGCTTC AACTATTATA TTTCGACCTA CTTTTGCTAC TGGAACTGTA
GATTGGACAT GTACTGGTGG TACTGTTCAG GATAGCTATC GCCCTTCCAA CTGCCGTTAG
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| Protein sequence | MKKVQQGFTL IELMIVVAII GILAAIALPA YNDYTTRAKV SEGIGLAAAA KSAVSEYRIS
LAAYPTNNTL AGLPTQIASK YVSSVNVGAG GIITVGYKAA AGVTAASTII FRPTFATGTV
DWTCTGGTVQ DSYRPSNCR
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