Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0791 |
Symbol | |
ID | 3966390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1021703 |
End bp | 1023526 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637919853 |
Product | Alpha-L-arabinofuranosidase |
Protein accession | YP_526265 |
Protein GI | 90020438 |
COG category | [R] General function prediction only |
COG ID | [COG3940] Predicted beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.570389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.122086 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAAGA TAGAAGAAAT AATGAAACAC ACAGCGCGCA CTATAGCGCT AGGTGCAACA GGTGCCGCCT TGCTAACGGG GTTAATTGCC TGTAACGGTA CCAATGTGAA TACAAACGGG GATACCCAAC AAGCAAGCAT TAAAAAAGCG CCAGAAGGCA TGTTTGCCAA CCCGTTGTTC GCCAATGGCG CAGACCCTTG GTTAGAGTAT TACGATGGCA ATTACTACCT CACTACCACC ACATGGACAT CGCAACTTGT TATGCGTAAA TCACCCACGT TGGATGGTTT GTCTACTGCG CTGCCGGTGA ATGTATGGTC CGATTCAGAT TTAACCCGCT GCTGTAACTT TTGGGCGTTT GAATTCCATC GCTTAAACGG CCCTAACGGC TGGCGTTGGT ATTTAATGTA CACCTCGGGC CAGCACGGCA CTTTAGATCA CCAACACTTA AGCGTATTAG AAAGTGTGGG TGACGACCCT ATGGGGCCAT ACACCTACAA AGGTGAAATG ATGCCCAATA CATGGAATAT AGACGGCAGT TATTTAGAGC ATAATGGCCA ATTATATTTG TTGTGGTCTG AATGGGTAGG TGACGAGCAG CAAAACTTTA TATCTAAAAT GACCACCCCA TGGAGCATTG AAGGCCCGCG AGCACTGTTA ACTCGGCCGG AAGCAGAGTG GGAAAAAAGC GGTCGCAAAG TTAACGAAGG CCCAGAGATT CTAAAAAAAG ATGGTCGTAC CTTTTTGATT TACTCGGCGA GCTATTGCGA TACGCCAGAT TATAAACTGG CAATGAAAGA GCTAACGGGC GACGACCCAA TGAACTCCGA GCACTGGACT AAATACGATA AGCCCGTGTT TGAAAGAGGG AACGGTGTGT TTGCCCCAGG CCACAATGGT TTCTTCAAAT CGCCCGATGG CACAGAAGAT TGGATTGTGT ACCACGGAAA TTCGAAAGAA GAGCACGGCT GCGGTGCAAC GCGCTCTGTG CGCGCACAGA AATTTACTTG GAACACAGAC GGCACCCCAA ATTTTGGTGA GCCAATACCA GAAGGCCAAT TTTTGCCCTT ACCTTCTGGC GAAAACGGTC CTTTAGTGAC TGCACTGCAA GGTGCACGTA TTCAGTTGCG CAATGGCGAA AGCTGTTTAT TAGCCGAAGG TAAAGAGCTG AAGCAGGGCA GTTGCCAAGC AGAAGCCAGT TTATGGGTAA TGGATAACAC GGCAGATAAT CACTACCGCT TTGGCAATGT AGCCAGCAAT TTATTTTTAA CGGCAGACGA AGGCCTTAGT CAGAGTGCCT GGGTTAATAC TGCAAGCCAG CGCTGGGCAC TTAATGCAGG CGAAGGTAAC TTTGTTGCGT TTACAAACAA GTACACCGGC GATGCGCTTA TGCAAAATAA TTGGCAAATA CTACCGGTTG GCAAAGTGGC AATTAGCAGC ATTCAAAGTG GCCGCGTATT ACAGGCGTGC GATAAAAACA GCGCGAATGT AAACCAAGGC GGCTGGCAGG GTAGGGCTTG TCAAGCATGG CAATTTAACC CAGCAAGTGA AGGCCATGTG CAAATTAAAA CGGGCAACCA ATGTTTAACC GTTGAGAATA AATCCATAGT GCCTGGCACC AATGTTATTG CCGGCGAGTG TGAATCAACT AGCAGCCAAT GGCTTTATCA ATTAGATAAA GAAGGCCGCG CAACCTTCAC AAACCGCGAA AGCAAACAGC GTTTAGATTT AGCAAACTGC GGCCTAGCCG ACGGCACCAA CTTCGCACAA GCCCCTGCGT TAGATACTAT TTGCCAAGCA TTCCAAGTGC GTTATTTACC GTAA
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Protein sequence | MKKIEEIMKH TARTIALGAT GAALLTGLIA CNGTNVNTNG DTQQASIKKA PEGMFANPLF ANGADPWLEY YDGNYYLTTT TWTSQLVMRK SPTLDGLSTA LPVNVWSDSD LTRCCNFWAF EFHRLNGPNG WRWYLMYTSG QHGTLDHQHL SVLESVGDDP MGPYTYKGEM MPNTWNIDGS YLEHNGQLYL LWSEWVGDEQ QNFISKMTTP WSIEGPRALL TRPEAEWEKS GRKVNEGPEI LKKDGRTFLI YSASYCDTPD YKLAMKELTG DDPMNSEHWT KYDKPVFERG NGVFAPGHNG FFKSPDGTED WIVYHGNSKE EHGCGATRSV RAQKFTWNTD GTPNFGEPIP EGQFLPLPSG ENGPLVTALQ GARIQLRNGE SCLLAEGKEL KQGSCQAEAS LWVMDNTADN HYRFGNVASN LFLTADEGLS QSAWVNTASQ RWALNAGEGN FVAFTNKYTG DALMQNNWQI LPVGKVAISS IQSGRVLQAC DKNSANVNQG GWQGRACQAW QFNPASEGHV QIKTGNQCLT VENKSIVPGT NVIAGECEST SSQWLYQLDK EGRATFTNRE SKQRLDLANC GLADGTNFAQ APALDTICQA FQVRYLP
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