Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0740 |
Symbol | |
ID | 3966261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 954667 |
End bp | 957249 |
Gene Length | 2583 bp |
Protein Length | 860 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637919802 |
Product | organic solvent tolerance protein, putative |
Protein accession | YP_526214 |
Protein GI | 90020387 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1452] Organic solvent tolerance protein OstA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACAAAAC GCTATTTTTC ACTGCTTGCA GTATGCTCCG CAATTGCAAC AAGCACATTT GCTGATGATA CCCCTACTAA TAGTTTAAGT TTGGGCAAAA CCTATTTGCG ATGCTACCCG CAAGCCGACT CCAACCAGTG GGATTGCGCC GAATACTCCA GCGAAACCAA TCTACCTATA GGCCGCAGCC AAATTCAGCA AGCGCCTAAT GCCTACGACT TTGTTTCTGC AGAAAACCTT ACCCCCGCCG CCCAGTCGGC TCTGTTGCCG GGCTGCACGG GTATGTACAT AGACCCGCTG GGCGACCAAA CCAATGCCCC TAGCCCCGAA AACACCCCTC TTATTGTAGA GGCCGACGAC TCGGTGCTGA CAGGCTCACA AAAAGCCCAG CTAGACGGCA ACGTGCAAAT CTCTCAAGGG GCGCGCTCTA TTCGAGCGGA CTCCATGACC TACAGCCGCG AAACAGAAGA AGCAAGCCTG GCCGGTGGCG TAACCATTCG CAACCCGGGC CTACTTATTC GTGGCGACAA GGCCAGCATG TCCACCACGC GCAACCAAGC GTCCTTCGAA AACGCCATAT TTGTATTGCA CGGCCAACAT ATTCGCGGCC AGGCTGATGC CATTCGACAA ACAAGCGACA GCAGTATCGT GCTGGAAGGC GGCAGCATTA CCAGTTGCGA ACCGGGCAGT AACGCTTGGT CCCTAGGTGG TGCCGAGATA AAAATAGACA ACGAAAAAGG CCAAGGCACC GGCAAACACA TTACCCTTAA AGTGGGTAAG GTGCCGATCA TGTATGTGCC TTACATCGCC TTTCCTCTGG GCGATCAGCG CCAGTCCGGC CTGTTATTTC CATCTATTAG CAGCAGCGAC AACGGCGGGC TAGATGCGGC GGTGCCTTTC TATTGGAATA TGGCCCCCAA TTACGACGCC ACCATCACGC CGCGCATTAT TTCTGGCCGC GGCGCTATGC TAGAAGTAGA AGGCCGCCAT TTAAATAAAA GCTTCTATAC CGAATCGAAT ATTGCCTATT TGCCCAACGA TGACGGCGGG CAAGATAAAG ACTTAGACAC GCTGGTGTCC AACGGCGACA TTACCGAGAG CCAAGCACAC CCCTACACGG GCCAAAACCG CTGGCTCGGC CACCTCAGCC AGCAGGGCGG CAGCGCCAGT AATGGCGGCT GGTATTCAAC CATCGACTTC ACCAAAGTTA GCGATCAAGA TTACTTTCGC GATTTGGGTG CCTCGTCGTT TAGCGAGCAG AATCAATCCT ACTTAGATCA GCGCGCCGAG CTCGGCTACC TGTTCGAACA CTGGACAGTA AGCGCCATGG CGCAAAACCG CCAAGTGCTG CTGTACGATC TCGATACCCC CTACCGCAGA GCGCCGCAGC TTAACGCTAT TGGCCACTAC TCGGTGAATG GGTTTGAATT TAAACTCGAT AACGAGCTGG TAAGGTTTGA TCACCCCTCA AACGAATGGC GCAATGGCGA CACCTTAATA ACGGGTAGTC GGTTAAGTAC CGATTACCGC GCAGCTTGGC CAATACGCGG CCGCTGGGGT TTTATCAAAC CAGAAGTGGG CTACAAGGCG TTAGGGTACC AGCTCGAGTC AGACGGCTTA GCCAGCAGTG CAGAAAGCAG CCCAACCCTA GGGGCGGCGC AGGCCAGCAT AGATATGTCG GTAATATTTG AGCACCGCGG TGGCAGCATT ATGCAGACCA TCGAACCGCG TGTTTATTAC CTGCATCGCG CCTATACCGA TCACAGCGAT CTGTACGCCG TAACCGCAGA CGGTCAAAAT GTGAATTTTG ATACCTCTAT ACGCACCTTT TCGTATAGCC AGCTATTCCG CGATAGCCGC TTTGGCGGGC GCGACAGACT AGACGATGCC AACCAAACTA CCGTGGGTTT AACCTCGCGC TGGTACAGCA ACAACAGTGG CCGCGAATTG TTTAGCGCCA GTATTGGTCA GGTGTTCCAC AACGCCGACC GCCGCGTAGG CTTAAATGGC GAAGAGCTAA ACACAGGTCA AACCTCTGAG CTGGCAGCCG ATGTATCGGT AATGCTTGGC CCGCTCTCGC GCTTTTACGT CAACTCTATA TACGACACCG AAGCGGCAGA AATCACCCGC GCAAGCTCTG GGGTGTATTA CCATTCCCAA GACTTAAGTA CACTGGCCAA CCTGTCGTAC TCTTACGTGC GCGACTACCG CCAATCGTCG ATAGCCGCAG GCACCACCGA GGCCACAGAT ATAGACCAAG TAGACCTGTC GTTCGTTACC CCCATTAACA AACAGTGGAG TTTAATGGGC CGGTATAACT ACGACTTTAC CCAAGCACAG GAACTCGAGA CCTTTTTAGG GTTCGAATAT AACGATTGCT GCTATCGTGT GCGCCTCTTG GCGCGAAAGT GGCTGGACAG TAATATAGCG TCCCTAACAG ACAATCACGA CCTAGAACAC GACCAAGGCG TATTCTTTGA AGTGCATTTC AAAGGCTTAG GCGGCTCTGG CGCCAAGGTT AACAGTATTT TAGAAGACAG TATTCGCGGG TATCAGGAGC GGGAACGTCG CAACAAACAG TGA
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Protein sequence | MTKRYFSLLA VCSAIATSTF ADDTPTNSLS LGKTYLRCYP QADSNQWDCA EYSSETNLPI GRSQIQQAPN AYDFVSAENL TPAAQSALLP GCTGMYIDPL GDQTNAPSPE NTPLIVEADD SVLTGSQKAQ LDGNVQISQG ARSIRADSMT YSRETEEASL AGGVTIRNPG LLIRGDKASM STTRNQASFE NAIFVLHGQH IRGQADAIRQ TSDSSIVLEG GSITSCEPGS NAWSLGGAEI KIDNEKGQGT GKHITLKVGK VPIMYVPYIA FPLGDQRQSG LLFPSISSSD NGGLDAAVPF YWNMAPNYDA TITPRIISGR GAMLEVEGRH LNKSFYTESN IAYLPNDDGG QDKDLDTLVS NGDITESQAH PYTGQNRWLG HLSQQGGSAS NGGWYSTIDF TKVSDQDYFR DLGASSFSEQ NQSYLDQRAE LGYLFEHWTV SAMAQNRQVL LYDLDTPYRR APQLNAIGHY SVNGFEFKLD NELVRFDHPS NEWRNGDTLI TGSRLSTDYR AAWPIRGRWG FIKPEVGYKA LGYQLESDGL ASSAESSPTL GAAQASIDMS VIFEHRGGSI MQTIEPRVYY LHRAYTDHSD LYAVTADGQN VNFDTSIRTF SYSQLFRDSR FGGRDRLDDA NQTTVGLTSR WYSNNSGREL FSASIGQVFH NADRRVGLNG EELNTGQTSE LAADVSVMLG PLSRFYVNSI YDTEAAEITR ASSGVYYHSQ DLSTLANLSY SYVRDYRQSS IAAGTTEATD IDQVDLSFVT PINKQWSLMG RYNYDFTQAQ ELETFLGFEY NDCCYRVRLL ARKWLDSNIA SLTDNHDLEH DQGVFFEVHF KGLGGSGAKV NSILEDSIRG YQERERRNKQ
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