| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0591 |
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| Symbol | |
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| ID | 3964998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 736120 |
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| End bp | 737154 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637919654 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_526067 |
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| Protein GI | 90020240 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0167634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACAA AAGGTCGCAA ACCTACATCC TTTGATATCG CCTACCGTGC AGGCGTATCG
CAATCTACTG TATCGCGCGC ATTGCGCGAT AGCCCCTTGG TTAACTTAGA AACGCGCCAA
AAGGTGCAGG CCATTGCCAA AGAGCTGAAT TACAAGGTAG ATAAAAACGC GCGCAATTTG
CGCTCTCAGC AAACCAATAC CATTGCCCTG TTATTGTGTG AAGATCACGG CACAGGCGAT
TCGCTAATCA ACCCGTTTTT CTTATCTATG GTGGCCAGTA TTGTGCGCGC TAGCGCTAAC
CGCGGGTATG ACGTACTTAT CTCGTTCCAG CAATATAGCG ACGACTGGAG CGCCGAATAC
GAAGACGCCA ATCGAGCCGA TGGCATCATC TTTTTAGGCT ACGGCGACTA CACCACCTAT
GTGCAAAAGC TCAATCACCT CGATGAAGAA GGGGCGCACT ACATTACCTG GGGGCCAGTA
CTGCCTGGGC AGCCTGGGGT GTCTATTGGT TGTGATAATT ATAATGGCGC TCGCGAGGCC
GTGAAACACC TGCTGGCTAT AGGCCATAAG CGCATTGCGT TTATAGGTGA TACATCGGAT
AGAAGCCCAG AATTTAAACG GCGGTTCGAA GGTTATGTAC AGGCACTAAA CGACGCCGGT
ATAGAGTTTG ACCCAGAGCT GCAGCTAGAT GCCGAAACCT CAGAAGACTC GGGCTACAAG
GCGGGTTTAA AACTGCTGGC AGATAAAACC GATTTCGACG CAATTTTTGG TGCGAGTGAC
TTAATTGCTA TTGGCGCCAT GAAAGCGCTA GAAGAGGTGG GGCTGCTTAT CCCCGCCGAT
AAAGCGGTGA TGGGCTTTGA TGATATCCCT GTTTCTGCCT ACACCTACCC ACCGTTATCT
ACTGTGCGGC AAAACACCGG TAAAGCAGGG GAGCTACTAG TGGAGAACCT GTTAGCACTT
ATCGCTGGCG AATCGGTGGA ATCGTTCTTA ATGCCCGCAG AGCTTACTAT TCGCGGGTCT
TGCGGTACTA AGTGA
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| Protein sequence | MTTKGRKPTS FDIAYRAGVS QSTVSRALRD SPLVNLETRQ KVQAIAKELN YKVDKNARNL
RSQQTNTIAL LLCEDHGTGD SLINPFFLSM VASIVRASAN RGYDVLISFQ QYSDDWSAEY
EDANRADGII FLGYGDYTTY VQKLNHLDEE GAHYITWGPV LPGQPGVSIG CDNYNGAREA
VKHLLAIGHK RIAFIGDTSD RSPEFKRRFE GYVQALNDAG IEFDPELQLD AETSEDSGYK
AGLKLLADKT DFDAIFGASD LIAIGAMKAL EEVGLLIPAD KAVMGFDDIP VSAYTYPPLS
TVRQNTGKAG ELLVENLLAL IAGESVESFL MPAELTIRGS CGTK
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