| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0547 |
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| Symbol | |
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| ID | 3967890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 667338 |
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| End bp | 669449 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919610 |
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| Product | beta-propeller domain-containing protein |
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| Protein accession | YP_526023 |
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| Protein GI | 90020196 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4880] Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000139284 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCAC TACAAATGCA CACACTAAAG TTACTTGCTA CAACAGTATC GGTAATAGCA
TTAAGCGCAT GCGGCGGAGA TTCATCCTCC GGCGGTACAA ATGGCGGCAG CTCTTCCGGG
GCTTCCTCCT CGGGTGGCAG CCAAGTGCAG CTTACCGTTG CCACGCAATC GAAATTAAAA
CGGGCGACAA GCAGCGAACT GGAGACACAC ATTAAAAACG GCATTAGCTA CCAAGTATAT
GATCAGTTCG TTGCTTGGGA AGCGGTAGAT GACGCAATAG CCACGCCAGA AGCAGCACCG
CAAAGCGATA GCGACAGCAG TTCTAGCTCT GGTTCAGGCA ACTATTCCAG CACCAATACC
TATGTAGTTG GTGTAGATGA AGGCGATTAC CTTAAATATG ACGGCGATTA CCTTTACACA
GTGCAATATG GCGAGTACTA CAACGCCCCC ACCAAGGTAC GCATTCTTGC CAGCTCGCCC
AGCGATGCTA GCGCCAGCTT GGTGTCTGAA ATCGAGCTAG ATAGCTATGC AACACCGTCG
CTGTATTTAG TAGATAACGG CGACGCAGCG GGTTCAAACC TGCTTGCCCT TAGCAGTGAA
GCAAATTATT ACAGCATACA ACCTTTTATA GATGTAGACG TCGAGGCGAC CAGTTTGCCC
TATTACACAT CGCATTCTGC GGTTAAAGCC AACCTCTACG ACTTGGCAGA CCCAGCCAAC
CCAGCGCTCG ATTTTGCGCT AGAAATAGAC GGCTACTTAC AAAACAGCCG CAAAGTGGGC
GATTACCTGT ATTTGGTACT TAACCACAAT ACCAGCCTTA TTTATTACGA GCTGCATGAC
GCCGAAAATG AAAATGAAGG CAGCGACCAA AATAGCTACA ACCAAAAAAC GTTAGCTGAG
CTCTTACCTC ACTACACGAT TAACGGCGGC ACGCCCCAAC CACTTCTAAC TGGCGACAAC
TGCTATGTAC CTTCAGATAT AACCGCCAAT CACGGTTACC ACTCTTTAGT TAGCGTAGTA
GCTATTAATC TTGCAGAGCA GGCCATTACC TCTAGCACAT GTATCAACTC GCCTGTGGAA
GGCATTTATA TGACGCCAAC CAGCTTATAC GTTGGCGCCA ACAGCTGGTA CACCAGCCAA
CTCGATGCCC CAGTAAGACA AGAGAGTGGC AATGGCGCGG ATGTAGCAGT TAGCCCAGAG
CCTTCGCAGT ATTACTCCGT GGTACATAAA TTTACCGTGG CCGATGGTGC AGTCACCTAC
CGCGCGACAG GTGCAGTGGA AGGCCAAGTT AACTGGTACC AAGCCGGCTT TTTCGTAAAC
GAAAATAGCG ATTATTTGCG TGTAATATCT AGCGATACTT GGTCGGGCGT GACTTATCCT
CACAAGCTCA CCGTATTAAA AGATACCGGC GAAAATAACG ACCTGATACA AGTGGCACAA
ATTCCCAATG CCGAGCAACC CGCGCCGATA GGCAAACCGG GCGAAGAGAT TTACGGAACC
CGCTTTGTAA ACGAGCGCGC CTATATCGTA ACGTTTATGC GCACAGACCC ACTCTACGTA
GTCGACTTAA CTAACAACGA AGCTCCCGCA ATTGCTGGCG AGTTAGAAAT ACCCGGGTTT
AGCTCTTACT TGCATTCAGT AAGTAACAAT TACTTGCTAG GCGTGGGCTA CAACGTAGAC
CCAGATTCGC CATGGGCGCA ACGCTCTGGG GTTAAAGTAA GCCTTTATGA CGTTACTGAT
ATCACCAACC CAACCGAAAT AAACAACTAC ATAATTGGTA GCAAAGGTAG CGATACTGCC
GCGACCCACG ACCTACACGC GCTAACCTTC TTACAAACAA ATGACGATAC CTTGCGTTTT
ACACTGCCAA TAAGTAAATC GGAAAATTAC AACTGGCAGG GCACCAACCT CGAGCTATTT
GAAGTGAATA ACATCACCAC CAGCGCAGGC TTGAATCACG CGGGTAGCAT TTCCCCCACC
TCGGCCAGCA ATGCATACTC CTATTGGAGC GACCGCGCAG CAATGCACGA CGATACCGTG
TATTACTCGC ACAACGGCAA CATATGGTCT GCCTTCTGGC AAACACCTAG CCAAGCAAAC
GGCCCGCAAT AA
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| Protein sequence | MHALQMHTLK LLATTVSVIA LSACGGDSSS GGTNGGSSSG ASSSGGSQVQ LTVATQSKLK
RATSSELETH IKNGISYQVY DQFVAWEAVD DAIATPEAAP QSDSDSSSSS GSGNYSSTNT
YVVGVDEGDY LKYDGDYLYT VQYGEYYNAP TKVRILASSP SDASASLVSE IELDSYATPS
LYLVDNGDAA GSNLLALSSE ANYYSIQPFI DVDVEATSLP YYTSHSAVKA NLYDLADPAN
PALDFALEID GYLQNSRKVG DYLYLVLNHN TSLIYYELHD AENENEGSDQ NSYNQKTLAE
LLPHYTINGG TPQPLLTGDN CYVPSDITAN HGYHSLVSVV AINLAEQAIT SSTCINSPVE
GIYMTPTSLY VGANSWYTSQ LDAPVRQESG NGADVAVSPE PSQYYSVVHK FTVADGAVTY
RATGAVEGQV NWYQAGFFVN ENSDYLRVIS SDTWSGVTYP HKLTVLKDTG ENNDLIQVAQ
IPNAEQPAPI GKPGEEIYGT RFVNERAYIV TFMRTDPLYV VDLTNNEAPA IAGELEIPGF
SSYLHSVSNN YLLGVGYNVD PDSPWAQRSG VKVSLYDVTD ITNPTEINNY IIGSKGSDTA
ATHDLHALTF LQTNDDTLRF TLPISKSENY NWQGTNLELF EVNNITTSAG LNHAGSISPT
SASNAYSYWS DRAAMHDDTV YYSHNGNIWS AFWQTPSQAN GPQ
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