| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0545 |
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| Symbol | |
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| ID | 3967888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 665582 |
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| End bp | 666313 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637919608 |
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| Product | LamB/YcsF family protein |
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| Protein accession | YP_526021 |
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| Protein GI | 90020194 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000000543397 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTAA ATTGTGATCT TGGTGAAGGT TTAGATCACG CCGACGCGGC CATTATGCCC
CTTATCCATC AGGCTAATAT TGCCTGTGGT GGCCATACTG GCAACGCCGC GAGTATGGCC
AAAGCAATAC AACTTGCGCT TAAACACCAC GTTTGCATTG GCGCTCACCC CAGCTACCCC
GACCCAGATA ACTTTGGCCG CACCTCGCTC GCTATACCGT TAGACACGCT GCGCGAGAGT
ATTGCAGAGC AAATACTCAG CTTGCACCAA GCCTGTACAG CTTTGGGTGG CAAAGTAGAA
TACGTCAAAC CCCACGGCGC CCTGTATAAC GACCTGCTGC ACAACCCCGT ACTGCTAGAA
ATGCTACTCG AGCTTATTCG CAGTGAATTT TCATCGCTAA GCCTTATGAT GCAAGCTACG
CCCCAGCAAC ACATTCACGC CCAGCTAGCA GCCCAAGCGG GTGTAACCTT GCAATTCGAA
GCCTTCGCCG ACCGGCGCTA TACCCCCGAA GGTTATTTGC AAGCGCGCAC AATAGAGGGG
GCTGTATTGC ACAATGTAGA TGACGTGATA GAGCAGGCAA ACCAACTACT TACCCACCAG
CGCGTACTAA GTACCAACGG CACTTGGCTA AACGTGAATG CCTCAAGCCT ATGTGTACAT
GGCGACAACC CCACGGCGCT GGCTGCGGTT CGCGCCATTA GCAGTAACCT TAAAAGCCTA
GCCAGTAAGT GA
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| Protein sequence | MKLNCDLGEG LDHADAAIMP LIHQANIACG GHTGNAASMA KAIQLALKHH VCIGAHPSYP
DPDNFGRTSL AIPLDTLRES IAEQILSLHQ ACTALGGKVE YVKPHGALYN DLLHNPVLLE
MLLELIRSEF SSLSLMMQAT PQQHIHAQLA AQAGVTLQFE AFADRRYTPE GYLQARTIEG
AVLHNVDDVI EQANQLLTHQ RVLSTNGTWL NVNASSLCVH GDNPTALAAV RAISSNLKSL
ASK
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