| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0248 |
|---|
| Symbol | |
|---|
| ID | 3968090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 312012 |
|---|
| End bp | 312758 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637919308 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_525724 |
|---|
| Protein GI | 90019897 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCGC CTTCACTCTA TGCAGACTTG TCCTGCTACT ACGACCTACT GTGCTCAAGT
ATTGATTATC ACGAACAAAG CGACTTCGCC GTACGCGCGC ATCGATTGTT TGGTAGTGGT
GGTAATGCCT ACTTAGATTT AGGCTGTGGT TCGGGGCCAC ACTTAGCCCA ATTGGCTGTA
GCGGGTTATG TGTGTAGCGG CTTAGATTTA AGCCAAGACA TGCTCAACCT AGCCGCACTG
CGTATTCCAC AGGCAGAGTT CTATTGCCAA AATATGAGTG AGATGGCGCT GCCCAAACAA
TTTGATTTAA TTACCTGCTT TTTGTACTCC ATTCACTACT GCTACCCGCA TGTGCAGTTG
CAGCAAACAT TGCGCAAAGC CTACGGTGCG CTAAATGCTG GTGGGTTATT TTGTTTTGAC
GCGGTAGATA AAAATACCAT TGCTAATGAT GCTGGCCACA CCCATCACGT TAATCACAAT
ACAAGTGAAC TGCGTTTTCA AAGCCGCTGG CATTACAGTG GCACTGGCGA CAAGCTAGAC
CTGCATATTG CAATAACAGA AACCACTGCA AACAATATTA AGCACTACGA TGAAACTCAT
TCCATGAGTG CAATAACAAT TCAAGAGCTA ATTTCTTTAG CCCAACAAGA AGGATTTGAA
GTAACGGTAC TAGAGCGCGA CTTTGCTACA CTTCAAGCGT GGGACCAAGT TCAAGGAAAT
GTGCTTTTTT GCTGTGTAAA AAAATAA
|
|---|
| Protein sequence | MPAPSLYADL SCYYDLLCSS IDYHEQSDFA VRAHRLFGSG GNAYLDLGCG SGPHLAQLAV
AGYVCSGLDL SQDMLNLAAL RIPQAEFYCQ NMSEMALPKQ FDLITCFLYS IHYCYPHVQL
QQTLRKAYGA LNAGGLFCFD AVDKNTIAND AGHTHHVNHN TSELRFQSRW HYSGTGDKLD
LHIAITETTA NNIKHYDETH SMSAITIQEL ISLAQQEGFE VTVLERDFAT LQAWDQVQGN
VLFCCVKK
|
|---|
| |