| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0154 |
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| Symbol | |
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| ID | 3965384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 190549 |
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| End bp | 191976 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637919213 |
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| Product | 2-keto-gluconate dehydrogenase subunit-like |
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| Protein accession | YP_525630 |
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| Protein GI | 90019803 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATATG ATTTAGTTAT AGTAGGTACT GGCTTTGCCA GCAGCTTTTT TTTAAAGCGT
TATTTAGAGC GGTTTCCTGC CAAACGAATT CTAGTATTAG AGCTAGGCAG CAAGCTCACC
CACCGCTGGC GTGTAGAGAA CCGGCCTGAG GACGACTACA GCGGCGTGGT ATCAGATAAA
GACTATCGCA AACTTATTAA TAACCACACA CCCGAAAAGC CCTGGGTATA TACGCCCGGC
TTCGGTGGCG GTTCAAATTG CTGGTGGGCG GTATCCCCTC GCCTGCTGCC CAACGACTTT
AAAATAAAAA CACTTTACGG CGTAGGCCAA GACTGGCCCA TAAGCTACGA AGAGCTCGAA
CCATACTATT GCGACGCAGA AGATATAATG CAAATTGCAG GGCCAAGCGA GCATACCCCC
TTCCCAAGAA GCCGCTCATA CCCGCAGCCG CCTCATAATT TTACCAGTGT AGATAAGCTC
ATTAAGCAGC ACTACCCAAA TGAATTTTAT AACGCACCGT GCGCTAGACC AAGCTTGGGC
ACGCCCAACA GGCCTAAATG CTGCGCTACA GGTGTATGCA ACCTTTGCCC CATAGACTCG
AAATTTACAG TACTAAATGA ATTAAGCCAC ATTTATCAGC ACCCCAGTGT AACCTTACAA
ACCAACAGCC AAGTCATTTC GCTAGATCAC AGCAACGGTG TTGTAAGTAA AGCTATCTAT
TTAGACGAGC AAGACAAGCG ACACGAAGTA GAAGCAGATC TATTTATGTT AGGTGCCAAC
CCATTGTTCA ACTCGCATAT ATTGTTAGGC TCTAATATTG ATAACGCCAA TATAGGCAAA
GGATTAGCAG AGCACGTTGG CCTAGGGGTG GAAGTAAACC TAATAAACCA ATCAAACCTA
GACGGTGGCA CAGCCCTTAC GGGCCACGGT TACTTCCTTT ATGATGGGGA ACATAGAAAA
GATCGAGCGG CTTGTATAGT GGAGACATTT AACACGCCAC ACATACGCTT AGAGCGCGGT
AAGTACACAC ACCGGCTAGG CATGAAGTTT GTTTTCGAAG AATTATACGC GCCTGAAAGT
ACGGTTTCGC TTTCAAGTAA CATTCGCATA CCTGATGTAC ATTATGCAGG CCATACGCAA
TACTTACACA ATGGCGTAGA CCACATTAAA AACAACTTCG AGCAATACTT TGGCTTTTTA
CCAATAGAAG ATTACGAGTT TTCCGAAATA CTTCCCGCAG AAGGGCACAT ACTAGGCACC
CATTTAATGG GCAACGACCC TAGCGATTCA GTAGTAAACA AGCACGGCTT TGTACACGGC
ATGAAAAACT TATTGGTACT TGGGGCCGGC AGCTTCTCTG CCATGTCACC AGCAAATCCA
AGCCTTACCG TTTCTGCGGT AGCATTAAAA AGCGCCAGCG AGCTATAG
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| Protein sequence | MKYDLVIVGT GFASSFFLKR YLERFPAKRI LVLELGSKLT HRWRVENRPE DDYSGVVSDK
DYRKLINNHT PEKPWVYTPG FGGGSNCWWA VSPRLLPNDF KIKTLYGVGQ DWPISYEELE
PYYCDAEDIM QIAGPSEHTP FPRSRSYPQP PHNFTSVDKL IKQHYPNEFY NAPCARPSLG
TPNRPKCCAT GVCNLCPIDS KFTVLNELSH IYQHPSVTLQ TNSQVISLDH SNGVVSKAIY
LDEQDKRHEV EADLFMLGAN PLFNSHILLG SNIDNANIGK GLAEHVGLGV EVNLINQSNL
DGGTALTGHG YFLYDGEHRK DRAACIVETF NTPHIRLERG KYTHRLGMKF VFEELYAPES
TVSLSSNIRI PDVHYAGHTQ YLHNGVDHIK NNFEQYFGFL PIEDYEFSEI LPAEGHILGT
HLMGNDPSDS VVNKHGFVHG MKNLLVLGAG SFSAMSPANP SLTVSAVALK SASEL
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