Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0152 |
Symbol | |
ID | 3965382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 188819 |
End bp | 189988 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637919211 |
Product | hypothetical protein |
Protein accession | YP_525628 |
Protein GI | 90019801 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATACAA GACCACAAGA GATATTCACG TTCCTCCAGC CCCTCCGACT ACCAGGCATC ATCGCGCTTT TACTGACTTT TTGGGTCATA AAAAACTTCG ATAAAAACCT TCTCAAGATG CCATCTATAA GTTTTGTTGT AAAGTTTGGA GGGCTTTGCC TAGTAAGTTT TTTGTGGTCG GTTCATACCA TTTCAATAAC AATTGGTATC ACCTGGCTTC TCCAATATTT ACCAGTTGCA ATCGCAGTGA CGCTGTTAGT TCGTAACTTA AAAAAATACA AAGTATTTAT TAGTTTATGG TGCATATCTC ATTTTTTCGT ATTTTTAATA ATATTTAAAA ATGGCGGGAA AGGCTCCGGC GACTTTTTAG CCGATGAAAA TGATGCAGCC TTAGGTGTTG CCATGGTATT ACCAATAATA CTTTATTTTT CCTATTGGCC AAATATCACA CCTAAACATA AGTTCCTATT AAAAACGCTT TTTTTAATAG CATGTGTTGC AATTATTGCT ACGCGCTCTA GAGGGGGGCT ATTAGGCCTT GTAAGCGCTG CAGGTATGCT CTGGTTATTC TCTAAATCTA AACTGAAAAT ACTTTTCACT GGGTCTTTAT TAGTACTTTT GGCAGGGTCA ATACTCCTAA GCTATTTACC GGAAGGATAT TTAGAGGATG TACAAGGTAT ATCCGACCCA AACGATAGCA CTCGAAGCGA AAGAATCGAA ACATGGGAAA TCTCATGGAT AATGTTTAAA GACAACCCAA TTTGGGGAGT TGGTGCAGGT AATTTTCCGT GGAACGTAAA TAGCTATCAG GATCAGGCTA GCTGGTGGTA CCCAGACGCG AGATCCCTCC ATGGACGACA AACGCATTCA TTATATTTTC AGCTTTTGGC CGATCTAGCA CTTGTCGGTA TGTTAATCTA CATTACATTT ATTATTACGA CTGCAAGCAG ATTATTTAAA ACTCAAAGGT CAATTTTCAA ATCTCAAAAT CCTGACCCTA ATCTAATAGG GCTTGGCCTA ATGTGTAAGG CACTTTATAT ATCAATTTTT CCTTTTTTGG TATCTGGCGC GTTTATCTCT GTAGGCTACT ATCCCCACAT CGTAATGTGG GGAACATTAA GTTATGCGAC GTTAGCAACA ATTGAAACCA TCACGAAAAA GTGTAACTAA
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Protein sequence | MYTRPQEIFT FLQPLRLPGI IALLLTFWVI KNFDKNLLKM PSISFVVKFG GLCLVSFLWS VHTISITIGI TWLLQYLPVA IAVTLLVRNL KKYKVFISLW CISHFFVFLI IFKNGGKGSG DFLADENDAA LGVAMVLPII LYFSYWPNIT PKHKFLLKTL FLIACVAIIA TRSRGGLLGL VSAAGMLWLF SKSKLKILFT GSLLVLLAGS ILLSYLPEGY LEDVQGISDP NDSTRSERIE TWEISWIMFK DNPIWGVGAG NFPWNVNSYQ DQASWWYPDA RSLHGRQTHS LYFQLLADLA LVGMLIYITF IITTASRLFK TQRSIFKSQN PDPNLIGLGL MCKALYISIF PFLVSGAFIS VGYYPHIVMW GTLSYATLAT IETITKKCN
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