| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0147 |
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| Symbol | |
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| ID | 3965377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 181595 |
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| End bp | 182782 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637919206 |
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| Product | helix-turn-helix, AraC type |
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| Protein accession | YP_525623 |
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| Protein GI | 90019796 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.586642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAATA TCAATTCAAG AGTCGCTATG AAAAAGCATT TGTTAATCGT TAGTAAATCT
TTTATTTACT CTACTAAGAA CGTAAATATG ACTAAATACG TTCGAATGAA AGATCATTAC
AGTGGAGATA TACTCGGTAC CACCAATAAA AAGCAATTTA AACACTACGA AGAAGATGGC
TTTTTATTTG TAACTTCTTA CCTATCCGAT AGATTAAGCA GAATTAAGCT GCTAGTAACG
TTAAAGTTTC TATTGCACGC CACCTGTACA GCTATCTATC GCCATTATTT TGTTAAAAAA
TACGATTTAA TTATAGCGAG GGAACCAATA TTAGCAGGCC CGCTAGCGCT ATTAATTAAA
CTGTTTACTG GGGCAAAATT AATAACCGAG CTTAACGGCA ACTACGTAAG CCCGGTAGTG
TGGGAAGATA TAGAAAACAA ATTTATTAGA AACTTAAAAC TGGGTTACTC TAAAAAGGCT
ATTCCCTTTG TATTAAAACG TAGTAATGGT ATTAAGTTAC TGTACCCTTC GCAAATTACT
CCGTATCTGT CTGAAGAAGA ACAACGCAAG CACACAATTA GTTGCTTTCA CGAATATACG
CCCATTTCTG AATTTCATAA AAGCACTGTC GAAGAAGACT TTATTATGAC TATGGGCTAT
CCATACAATA TTAAAGGCTT CGATATACTT GTATCTGCCT TCGACAAAAT AGCCCATAAA
TTCCCAACAA CTCAGGTGCA CCTAATAGGG TACTTAGAAA CTGCAGATAG GCAGTACTTA
GAATCGCTAC ATTCTCACCC AGACCAAATA AAGCTGTTAA AGCCGTTAGA GTACGATGCG
GCAATGGAAA AAATAAGCAA AACAAAATGC TTTGTGCTTG CTTCACGTAC AGAGGCAATG
GGGCGCGTAT TGCTTGAATC TATGGCCCAC GGCAAGCCGG TTATTGGTTC CACTGCAGAT
GGTATACCCA CATATATTCG CGATGGGGTT AATGGCTACG TTTTTGCAAG CGGTAACGTA
GATCAACTAG CGGAAAAACT TGAGGTAATG TTGTCTAGCG GTAGTAAACG CAAGATGTTA
GGTGATGCAG GCTACGAAAT TGTAATGGCT GAGTTGAGTG AACAACAATA TTTAGAGCGC
TATGGTGCAT TGATAGAAAA CGCATGTGGC GACGGAAAGA AAAAATAA
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| Protein sequence | MGNINSRVAM KKHLLIVSKS FIYSTKNVNM TKYVRMKDHY SGDILGTTNK KQFKHYEEDG
FLFVTSYLSD RLSRIKLLVT LKFLLHATCT AIYRHYFVKK YDLIIAREPI LAGPLALLIK
LFTGAKLITE LNGNYVSPVV WEDIENKFIR NLKLGYSKKA IPFVLKRSNG IKLLYPSQIT
PYLSEEEQRK HTISCFHEYT PISEFHKSTV EEDFIMTMGY PYNIKGFDIL VSAFDKIAHK
FPTTQVHLIG YLETADRQYL ESLHSHPDQI KLLKPLEYDA AMEKISKTKC FVLASRTEAM
GRVLLESMAH GKPVIGSTAD GIPTYIRDGV NGYVFASGNV DQLAEKLEVM LSSGSKRKML
GDAGYEIVMA ELSEQQYLER YGALIENACG DGKKK
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