Gene Sbal_2766 details

Gene Information

• Locus tag: Sbal_2766
• ID: 4844860
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 3250666
• End bp: 3252738
• Gene Length: 2073 bp
• Protein Length: 690 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640120002
• Product: TPR repeat-containing protein
• Protein accession: YP_001051122
• Protein GI: 126174973
• COG category: [R] General function prediction only
• COG ID: [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCTAC ATTTTATTCG CCCAGAATGG CTACTCGCCC TAGTGCCACT GGCTTTAGTG 
TTGTTGAGTT TATGGCGACA ACACGAGAGC CACAGCGCGT GGAATAGGTA TATTGCGCCG 
CACTTAGCCA AAATATTGGT CACCCAAGGC AGCAAGAAAT CCCGCCGTCC GTTGCATTTA 
TTAGCTTTCA CTTGGCTGAT TGCGACTTTT GCGCTCGCAG GGCCCGCCGT TAATAAACAA 
TCCTTACCTG TGTTTGCCGC CGAGCAAGGC CGCGTATTGG TGATGGACAT GTCTGTGTCT 
ATGTTCGCTA CCGATCTTGC GCCAAACCGG TTAACCCAAG CTAAATTTAG GGCTACGGAT 
CTGCTGCGTA ATCTTAAAGA AGGTGAAACA GGTTTAGTCG CCTTTGCCGG CGATGCCTTT 
ACTATCAGCC CGTTAACGCG CGATACCGGC ACGCTACTCA ATTTATTGCC GACCTTAAGC 
CCTGAAATCA TGCCCGTTCG TGGCTCAAAC TTAGCGGCAG GTTTAACCCA AGCTAAAACG 
CTACTGGCTC AGGGTGGGCA TATTCGCGGT GATATTATCG TGATGACAGA TGGCATAACT 
GCTGCCCAAT TTGATGACGC TAACTCGGCA TTAAGTGGCA CGCAATATCG TCTTGCGGTC 
GTCGCTTTTG GGACCAGCCA AGGCGCGCCA ATTCGTCTAC CCGACGGACA ATTGCAGCGC 
GACAGCAGCA ACGAAGTCGT TGTGGCCAGC ACTGACTTTG GCCTGCTGCA AAAACTGGCC 
GCGGATAACA AAGGCGTGTT AATCCAAAAT CGTACCGACG GCAATGATCT GGCCCAATTA 
CAACATTGGT TAAGTGATAC GGGCGATGCC AAAGCCACAG ATCTTGACGG TGAAACCTGG 
CAGGATCTCG GCCCTTATCT CGCCCTGCTA TTACTGCTGC CCGCCCTTTT CAGCTTTAGG 
CAAGGAATCG TGGCAAGCGT TGGATTTGCC ACTCTCATTG GCTGCTTACT GCTCGCGGCC 
GCGCCTCAGC CTGCCCATGC CAGTGTGTGG GAGGATGTGT GGAAAACGAC AGATCAGCAA 
GCGATGCAGG CCTATCAATC CCAAGATTAT GCCAACGCCG CTAAGCAGTT TGAGTCACCC 
CAATGGCGTG GCAGCGCCCA ATATAAGGCC GGTGATTATG AGCAAGCGCT GAAAACCTTC 
GAGCAAGATA GCTCTGCCCA AGGCCTCTAC AATCAAGGCA ATGCGTTGAT GCAACTCGGT 
AAACCCGATA AGGCTAAGGA GCGCTATCAA GCTGCACTTG AAAAACAAGC CGATTTCCCA 
GCGGCGAAGG CCAACCTTGA ACTGGCTGAA AAGCAATTGA AACAACAGCA AAAGCAGCAA 
GGTAAAAACG ATCAACAGGA TAAGAACCAA GATCAACAAG GCGATCAGCA GTCCGGTGAT 
TCCAATTCAG GTGACCAACA GTCTGGTGAT AAAAAGTCGC AGGATAAACA ACAATCTGAC 
CAAGATAGCG CTCAGAAAGA TAAGCAAGAT CAAGCGGGAC AAGAGTCTCA GGATCAACAG 
GACAATGCCA ATCCTGAGCA AAGCCCTGAG CAGCAAAAAG CGGATGAGCA ACAGTCTGAG 
CAGGATAAGC AAAATGGCAA TGCTCAGGAC AAGCAGGATG AAGCTCAGCA AGATCAAGAT 
AAAGCGCAAC AGGATCAACA AGCCAAGCAG CAAAATGCCG AGCAGGATGC AAAGGAAAAT 
GAGCCTGTAG ACAATTCACC TGTAGATAAT GAAGCTAAGA TGCAAGCGCA GGCTAACGCC 
GATACCGAGG AGCAAAAATC CGCTGAGCAA GCAAAGCAAA GCGTTGGCGC CAAAGAAGCT 
CCTGAGAAAG ATGCGCAAGA TAAACAAGAG GCTGCTATGA GTGAATCTGT CGAAGCGCCG 
CCAACTAATA GCGAACCGCT TCCCGCAGAA ATGCAGCGAG CGCTGAGGGG CGTGAGTGAA 
GACCCACAAG TGTTACTTCG CAATAAAATG CAGTTGGAAT ATCAAAAACG CCGTCAAAAT 
GGCCAAATAT CAAAGGATAA CGAACAGTGG TAA 

 

Protein sequence

MSLHFIRPEW LLALVPLALV LLSLWRQHES HSAWNRYIAP HLAKILVTQG SKKSRRPLHL 
LAFTWLIATF ALAGPAVNKQ SLPVFAAEQG RVLVMDMSVS MFATDLAPNR LTQAKFRATD 
LLRNLKEGET GLVAFAGDAF TISPLTRDTG TLLNLLPTLS PEIMPVRGSN LAAGLTQAKT 
LLAQGGHIRG DIIVMTDGIT AAQFDDANSA LSGTQYRLAV VAFGTSQGAP IRLPDGQLQR 
DSSNEVVVAS TDFGLLQKLA ADNKGVLIQN RTDGNDLAQL QHWLSDTGDA KATDLDGETW 
QDLGPYLALL LLLPALFSFR QGIVASVGFA TLIGCLLLAA APQPAHASVW EDVWKTTDQQ 
AMQAYQSQDY ANAAKQFESP QWRGSAQYKA GDYEQALKTF EQDSSAQGLY NQGNALMQLG 
KPDKAKERYQ AALEKQADFP AAKANLELAE KQLKQQQKQQ GKNDQQDKNQ DQQGDQQSGD 
SNSGDQQSGD KKSQDKQQSD QDSAQKDKQD QAGQESQDQQ DNANPEQSPE QQKADEQQSE 
QDKQNGNAQD KQDEAQQDQD KAQQDQQAKQ QNAEQDAKEN EPVDNSPVDN EAKMQAQANA 
DTEEQKSAEQ AKQSVGAKEA PEKDAQDKQE AAMSESVEAP PTNSEPLPAE MQRALRGVSE 
DPQVLLRNKM QLEYQKRRQN GQISKDNEQW