| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2540 |
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| Symbol | |
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| ID | 4843290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 2970496 |
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| End bp | 2972730 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640119764 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001050902 |
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| Protein GI | 126174753 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTGCCATA ATCACAGACA GTTAACACAA GCAAATTTTC AAAGGGACTT TTCTTTGCAT
TTACCCGCCT TCCAAACCGC CCATCTCAGA CTGGCAATTA TTCTGGGTGT ATTCGGCTTA
GTCCTGAATC TTTTTCCCAT CCCTTTATTC GCTAATGTGC AATTGATTCT CGGCAACGTG
GCAGTTGTGA TAGTGGCAAT ACTCTTAGGG CCTTGGTATG CATTGATCAC CGCACTATTT
ACCGCAACGG GACTCATGAT CGTGTGGTCG AGCCCGCACG TGTATTTACT GTTTTTACTC
GAAGCATTAT GGCTTGGTTT TGCAAGGCGC CGAGATATTC AAATACTCTA TGCCAGTGTG
AGTTATTGGG TATTATTGGG GATCCCGCTG TTAGCTATTT ATGTGGCTGT CATTGCTAAA
ATGCCCGCCA GCCATATTCC TTTTACTGCG ATAAAACAAG CCGTTAATGG CATGATTTAC
GCTGCAATTG GTGAACTCTG TGTGGTTGCT ATTCCAAGCC TATGGCATTT TAAAGGCAAG
CTGACCAATC TTAACCGGCG CACTTTTAGC TCGCAGCTCA GTTACTTGTT TACCTTAATC
ATTACTGTGA GTTTATTAGT TTCGTCCTTA GCCTTTAATC ACTTTTTCAT TGATAAACAA
CAGGTGTTGA TTAATCGCAA TCTGGACGAT ACGGCAACCC ATTTGAGCCA TGCAACCGAC
AACTATCTCG CTTACAACAC CCAAGTCATC GCTAGCACAG CCAAGTTTTT GAGCCTGTCG
AATGCAGATA TCAATGAGTG GCAGGCATTA CTGTCGAGCG TACACGATAG TAATCAAGGC
TTTAAAACCA TGTTACTAGC TAATGAGCAA GGCAACTTAC TCGCTGCCAG TCCGATGGCC
AATATAGTAA AATTAGACAG TCTCTCTGAC ATTTCTTCGG TGAGCGATAG GGAATACTTT
ATCCAAGCGT TTTACAACCA TAAAACCTTT GTATCACCTG CGTTTATCGG CAGAGGTTTT
GGTAATGACG TGATCGTTGC CATCAGTGCC CCCATTTTTA GTCCAAATGA TCCCAATCAA
GCCAGAGGGA TAGTCGAAGG CAGCTTAGAT TTACGCTATT TTTCCAGCAT AGATAAACAA
AACCTGCACC ATGAGCAGCA ATCTATTTTA CTGACAGATG AGAACAATAA TCTGATTTAT
GCCTCCGAAG GGTTAGGACT AGCACCGCTC ACCCCCTTGT CATTCAGCAA AGGCAGTGAG
ATTTATCGCG CCCGGCTTCA ACTGATGAAC CTGCATAACC TAGATTCAAA TACTCCTGAG
TACATCTATG CCCAGCATAA GTTAAACAAT GGTTGGCAAC TCTATGTTTT AGAACCTTTT
GTGCCGCTTC TAAAACTGGC TGAGCGCCAA TATGTCAACA CGGTAATTTT ACTGTTTTGC
TCCTTAGTCG GTGCCTTTTT TATCACTAAA GCCATCAGTA AGTTACTGAC CGAACCTCTG
TCGCTTTTAG CGCAGCATTT CGGTCCCGCT AAGCAAGAAA AAGCCAGCGA CGAGAAGTTT
GAACATGATC TACTCGATAA AAGCACCCCT AAAGAAATCT ATAGCTTGTA TGAAAGTTTA
GCCTCGAACC AACAAGCCTT ACTCGAACAC CAACAAGAAC TTGAACAAAA AGTACAGCAG
CGCACCCAAG ATTTAGAAGC CGCTAATGTG AAATTAAAGG ATTTAGCCGA GCGCGATCCG
CTGACGAATC TCTATAATCG CCGCTATACC GAGCATCAAT TTCCACATAT CCAACAGATG
TGCGAACGGG GTCAAGATGC CATGACGCTT GCCATATTGG ATTTAGACCA TTTTAAGCAA
ATCAATGATA CTTATGGCCA TTTGGGCGGC GACGAGTGTT TAAAAGTGGT TGCTGAACTC
TTAAGCTCGC TCTTCAAGCG AGATATTGAT TTGATCTCCC GCTACGGCGG CGAGGAATTT
TTGCTGATTT TACCTATGTG TAATGCCTTG AAAGTCGAAG CACATCTCAA TGAGTTTAAA
CGGCAGCTCG CAGGCACTGT GATCATCAAT CCGCAGGATC ATCGAAGCTT CAAGGTCACG
GCGAGTATCG GCGCTGTGAT TGCCAATGCC ACTTATAGCG ACTCCTTAGA GTACTGGCTT
AAACAGGCCG ACAATAACTT GTATCTGGCA AAGGAACAGG GACGTGATCG GGTTGTTTGC
AGCCTGATTG TTTAA
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| Protein sequence | MCHNHRQLTQ ANFQRDFSLH LPAFQTAHLR LAIILGVFGL VLNLFPIPLF ANVQLILGNV
AVVIVAILLG PWYALITALF TATGLMIVWS SPHVYLLFLL EALWLGFARR RDIQILYASV
SYWVLLGIPL LAIYVAVIAK MPASHIPFTA IKQAVNGMIY AAIGELCVVA IPSLWHFKGK
LTNLNRRTFS SQLSYLFTLI ITVSLLVSSL AFNHFFIDKQ QVLINRNLDD TATHLSHATD
NYLAYNTQVI ASTAKFLSLS NADINEWQAL LSSVHDSNQG FKTMLLANEQ GNLLAASPMA
NIVKLDSLSD ISSVSDREYF IQAFYNHKTF VSPAFIGRGF GNDVIVAISA PIFSPNDPNQ
ARGIVEGSLD LRYFSSIDKQ NLHHEQQSIL LTDENNNLIY ASEGLGLAPL TPLSFSKGSE
IYRARLQLMN LHNLDSNTPE YIYAQHKLNN GWQLYVLEPF VPLLKLAERQ YVNTVILLFC
SLVGAFFITK AISKLLTEPL SLLAQHFGPA KQEKASDEKF EHDLLDKSTP KEIYSLYESL
ASNQQALLEH QQELEQKVQQ RTQDLEAANV KLKDLAERDP LTNLYNRRYT EHQFPHIQQM
CERGQDAMTL AILDLDHFKQ INDTYGHLGG DECLKVVAEL LSSLFKRDID LISRYGGEEF
LLILPMCNAL KVEAHLNEFK RQLAGTVIIN PQDHRSFKVT ASIGAVIANA TYSDSLEYWL
KQADNNLYLA KEQGRDRVVC SLIV
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