| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2289 |
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| Symbol | |
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| ID | 4843343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 2661442 |
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| End bp | 2663739 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640119515 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001050654 |
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| Protein GI | 126174505 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGTC AAATCTGGCT AATAGTGCTT TATTTATCCG TAGTTTACTG TTCATTTAAT
CCTGTCCATG CGAACACTCT AGAGCCGAAG ATATCGACGG ACGTTAAACT TGAACCCGCT
TTTTGGTGGG CGGGGATGCA CAATCCTGAG TTACAGTTAA TGCTGTATAG CCGCGAGCTG
CCTAGCTTAC CGCAGCAGCT TAAGGTTGAT ATCCAAGGGC AAGGCATCAC GCTAAAAAGC
CTTGAACACA CTGATAACCC GCATTATCTG TTTATCAATT TAGATCTTAG CCAAGCTGCG
CCGCAAACCT TTGAGCTGGT GATTTCAAGC ACTGACTCGG CGTCAAAAAC CAACACGCCT
CTTTATCGCC TGCCCTATAC GTTGCAAGGG CGCGCTAAAG GTAGCCGTGA GCGCCAAGGG
TTTAGCAATA AGGATGTGAT TTACCTTATC ACGCCAGACA GATTCGCCAA TGGCGACACG
AGTAATGACA ATCAGGCCGA TATGCTAGAG CAAGTCGCAA CTAACTCTCC TAGCAATTCC
AACAATCCCT ATTATCCCGA TGCTCGCCAT GGCGGCGATA TCGCAGGGAT CAGCCAGCAC
TTAGCGTATC TGGCAAAGCT CGGGGTGACT CAGTTATGGA TCAATCCACT GCTTGAGAAT
AATCAAGCCC AATATTCATA CCACGGATAC TCAATTACCA ATTTGTACCG CGTCGATCCC
CGCTTTGGCA GCAATGAGGA TTATAAAGCC TTAGTCGCTA AGGCTAACAA GCTTGGCCTT
GGGGTAATTA AAGATGTTGT CGTGAATCAT ATCGGCTCTA ATCATTGGTG GCTCAACGAT
TTACCTAGCC AAGACTGGCT CAATGACGCC ACAAAAACGC AGCTACATAA TCGCGAATCT
AAGCCTGACT TGATTCAGTC TGCCGATACT AAATCCAGCA CTATTAAATC CAGCGTTACC
AGCCCCCGTT TTACCAATCA TAGGCGCACT ACAGTGCAAG ATCCCTACGC GGCAGCGCAA
GATCATATTG ATTTTGTCGA CGGCTGGTTT ACCGACACTA TGCCGGATCT GAATCAAAGC
AATCCCAAAC TGGCAACCTA TCTTATCCAA AACAGTATTT GGTGGGTCGA GTACGCAGGA
CTTTCAGGGA TCCGCGAAGA CACTTATTCC TACGCCGACA AAGGGTTTCT CGCTAAATGG
TCTAAGGCCG TAATGACTGA GTACCCGAAT TTTAATATTG TGGGCGAAGA ATGGACCGCA
AACCCCATCA CAGTTGCCTA TTGGCAAAAG GGCAAAATCA ATGCCGATGG CTATACCTCA
GATCTACCCA GTTTAATGGA CTTCCCGCTA TATGAAAAAT TAATTGCCAG CCTCAATGAG
CCAGAAAGCT GGGACACAGG TTTTATCAAG CTTTACGAGA TGTTAGCCAA CGATCTTGTG
TATGCCGATC CCAGTAAACT AGTGCTATTT GAAGGCAATC ACGACACCAA TCGTATCTTC
AGTTTAGTGA AAGAAAATAT AGACTTATAT AAGATGGCAC TCACCTATGT GCTGACCGCC
AAACGCATTC CGCAGCTGTT TTACGGTACA GAAGTGTTAA TGACCAGCCC GACCGAAGGC
CGTCACGATG GTGTTGTGCG CAGTGATTTC CCCGGTGGGT TTGCCAACAG TGCCACTAAC
GCCTTTACCG GCCAAGGGCT GAGTGAACCC CAGCGACAAG CACAGCAATT TGTCAGAACC
CTACTGAATT ACCGTAAACA ATCCCCTGCG CTACAATCGG GCGATTTACT GCACTTTGTA
CCGCAAGATG GTGTCTATGT GCAATTTCGT TGCGTATTAA ATGCGCCATT ATCAGCTGAA
CAAAAAGCCG AAGCGCTCAA ATCACTAATA CAAAACAATT CTCTAACTCA ACACAATGCC
TGCACTCAGC CCTCGGCCGA CAAAGTCATG GTGATTTACA ATAAAAATGA CAAGGCAGTC
ACGCTAGATA TAAACCGCTT TGCCAGTGTA CTTGGCGATA GCGGCGCCGC TACAGATATC
ATCAGTGGCA AAACCGTTTC ACTCAATCAA GCGATAACCT TGCCCCACGC AGGTGTCACT
ATTCTCGAGC TTAAGCTTAA GCCTAATTCT AAGTCTAAGA CTAAGTCGCC GCAGAATGCT
GGCTTGCCGA GCCGCCAAGA TTCAATGCTC TCTAGGAATC AAGCTAACGC TTTAACGCGC
GCTCATACTA ACAACAGTAC AAACAACAGC GCTAATAACC TAGCGAAAAA CTCAACTCAA
AAAGGAACTC AGCCTTGA
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| Protein sequence | MIRQIWLIVL YLSVVYCSFN PVHANTLEPK ISTDVKLEPA FWWAGMHNPE LQLMLYSREL
PSLPQQLKVD IQGQGITLKS LEHTDNPHYL FINLDLSQAA PQTFELVISS TDSASKTNTP
LYRLPYTLQG RAKGSRERQG FSNKDVIYLI TPDRFANGDT SNDNQADMLE QVATNSPSNS
NNPYYPDARH GGDIAGISQH LAYLAKLGVT QLWINPLLEN NQAQYSYHGY SITNLYRVDP
RFGSNEDYKA LVAKANKLGL GVIKDVVVNH IGSNHWWLND LPSQDWLNDA TKTQLHNRES
KPDLIQSADT KSSTIKSSVT SPRFTNHRRT TVQDPYAAAQ DHIDFVDGWF TDTMPDLNQS
NPKLATYLIQ NSIWWVEYAG LSGIREDTYS YADKGFLAKW SKAVMTEYPN FNIVGEEWTA
NPITVAYWQK GKINADGYTS DLPSLMDFPL YEKLIASLNE PESWDTGFIK LYEMLANDLV
YADPSKLVLF EGNHDTNRIF SLVKENIDLY KMALTYVLTA KRIPQLFYGT EVLMTSPTEG
RHDGVVRSDF PGGFANSATN AFTGQGLSEP QRQAQQFVRT LLNYRKQSPA LQSGDLLHFV
PQDGVYVQFR CVLNAPLSAE QKAEALKSLI QNNSLTQHNA CTQPSADKVM VIYNKNDKAV
TLDINRFASV LGDSGAATDI ISGKTVSLNQ AITLPHAGVT ILELKLKPNS KSKTKSPQNA
GLPSRQDSML SRNQANALTR AHTNNSTNNS ANNLAKNSTQ KGTQP
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